G134779


Basic Information

Item Value
gene id G134779
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11819257 ~ 11844832 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169199
aaaaaaaaaaaaaaaaaacagaccaaTTATGAACACATGTTGTTAAGCAAACATAGCTGTGGGGTTACGAAATGCTGTTTACAAGAATCATAAATAGCAATCTGACCAAACAGGGAccagttttaaaaacactgcaatctGAATACATCTCACACCAATGCGGCCGACTGCAGTTACGGATATGGGGGTCGACTTATATGGGCAAAAGACTAGTTGTTCACAGTGCATAACAGTGTGGTATAGGAGAGTATATAGTAGTAGgactgttgtttttcagttcatGTTTGATAGATGGTTagaggaacaaacaaacagtgcagtacaatctAATTGGGTTCTCTTGTCCCTGCTAGAAGTTGATCACACAGGTGTTCTACAAAAGTTTCttttatagtgttttatttttgttgttgatgctTTTGGTCTTATGTCTTGCATTCAAATTGCAAAGATGAAATGCCTGGGGTTGGGCCAGGAAGATAAAACACCACACGTTTTCATATGGGCAGAAAGGTTTACACAGCACTGTAGATTTGCCACTGCATGTGTAGAGCCCTCTGTTCTGTGATAGGAAGGAGAGAGTTTGCACAGCTTTGGTGCTGTATAGTTAGTGGCATATCTGTAATTGCACCAGTTTTCTCAAGACTTTGGAGGGGGGGTTGGAACGATTAGAAGCAAGCACAGCACACTGCTCATGTGAGGGGACTTAGCTATCTTCAAAAACCaaaagtaaacagaaaaaatagttttatagaTTGCTTTAGGCTTGGTCTTTCTCAGGTTTCTAACAAAAACATAAGACAACACTTCAGATTTCTTTGGTGCGGCAAATTACAAGACGATTCAATTGAGAGCAACTCTTATTTTCTATACCTCTGCTTCTAGCACCTTTGCAACCAGGCACACTGTGGAAGACTTGAGAATATATCTGTATTAAGTTGGTCACATCATTAATGCACTGCACGTGTACACAACTATATTAGACAGAAGAGCATTTCGTACAGGATGACTGtaaacgataataataataacggaAACTTAACTGAAAGCAAGCTTCAATCCTTCACCTGGTGCCAGAGTCGAAGCCATATATGCTAATAGGTTATGCTAATGCTGTTtgtctgagagagaaagagagaggggtcccactttctctctctctctctctccctattcTATTGCACTGTTTACTTTATTACTTacttttcattctctctctcgtCCTCCTCCAACCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169199 True 1236 lncRNA 0.39 2 11819257 11844832

Neighbor

gene id symbol gene type direction distance location
AMCG00012155 NA coding upstream 16132 11798577 ~ 11803125 (+)
AMCG00012151 NA coding upstream 68633 11738177 ~ 11750624 (+)
AMCG00012150 NA coding upstream 94151 11719340 ~ 11725106 (+)
AMCG00012153 NA coding upstream 118875 11690723 ~ 11700382 (+)
AMCG00012148 NA coding upstream 136329 11680310 ~ 11682928 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding downstream 56715 11901547 ~ 11913954 (+)
AMCG00012162 NA coding downstream 146683 11991515 ~ 12028909 (+)
AMCG00012161 NA coding downstream 188515 12033347 ~ 12036522 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding downstream 240526 12085358 ~ 12095939 (+)
AMCG00012168 NA coding downstream 287415 12132247 ~ 12141475 (+)
G134766 NA non-coding upstream 52846 11711250 ~ 11766411 (+)
G134749 NA non-coding upstream 314609 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 517192 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 585374 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 836463 10967276 ~ 10982794 (+)
G134877 NA non-coding downstream 71512 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 79436 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 274399 12119231 ~ 12119660 (+)
G134942 NA non-coding downstream 303235 12148067 ~ 12158458 (+)
G134944 NA non-coding downstream 314386 12159218 ~ 12159429 (+)
G134743 NA other upstream 373094 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 525358 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 758227 11049065 ~ 11061030 (+)
G134613 NA other upstream 884150 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 1135160 10629684 ~ 10684097 (+)
G134898 NA other downstream 186065 12030897 ~ 12031490 (+)
G134955 NA other downstream 327706 12172538 ~ 12172802 (+)
G134958 NA other downstream 336229 12181061 ~ 12181320 (+)
G134968 NA other downstream 346723 12191555 ~ 12192408 (+)
G135026 NA other downstream 721380 12566212 ~ 12716115 (+)

Expression


Co-expression Network