G134819



Basic Information


Item Value
gene id G134819
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11395960 ~ 11400701 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU169245
TGCAGAGTCAGAAGgggatcaaatacttttttcccccactgtacattgaaaatatggttatttgacataaattaTTCTAAATGAAACTGTGATAACAGACgattttaaattacagtaaaacGCTTCTGGGAAAAgagtgtatttctgtgtgtccAGATCATTCTCTGTGTTCATTCCTGAGGGctgccctgctctctcctctcccactgTGATATCAGCTGCTGCTCTTGGCTCTGCTCTGCTATGAGAGATCAGTTGTACTGAGACTCTGCTGAACCGCAATAAACCTGCAAAGCATTCAAACACCTGGTCTGGGGCTGCACttctttaatgatttatttctccACAAATCTGGAAAAGTTGTGCAATTGTTCCAGTTAAAATAACGACACAATTTAAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU169245 True 401 lncRNA 0.40 2 11395960 11400701

Neighbor


gene id symbol gene type direction distance location
AMCG00012139 NA coding downstream 7226 11382279 ~ 11388734 (-)
AMCG00012132 NA coding downstream 45023 11347488 ~ 11350937 (-)
AMCG00012129 kat8,LOC102799453 coding downstream 64679 11322207 ~ 11331281 (-)
AMCG00012130 NA coding downstream 76212 11312924 ~ 11319748 (-)
AMCG00012133 NA coding downstream 95139 11298027 ~ 11300821 (-)
AMCG00012141 NA coding upstream 135325 11536026 ~ 11540090 (-)
AMCG00012149 NA coding upstream 255375 11656076 ~ 11657132 (-)
AMCG00012154 NA coding upstream 375740 11776441 ~ 11789617 (-)
AMCG00012157 NA coding upstream 407298 11807999 ~ 11813611 (-)
AMCG00012156 NA coding upstream 442367 11843068 ~ 11866778 (-)
G134648 NA non-coding downstream 413169 10967276 ~ 10982791 (-)
G134402 NA non-coding downstream 1048235 9852901 ~ 10347725 (-)
G134451 NA non-coding downstream 1089933 10303569 ~ 10306027 (-)
G134443 NA non-coding downstream 1108831 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 1194735 10200802 ~ 10201225 (-)
G134817 NA non-coding upstream 95974 11496675 ~ 11769509 (-)
G134840 NA non-coding upstream 159396 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 202822 11603523 ~ 11604157 (-)
G134849 NA non-coding upstream 259020 11659721 ~ 11660305 (-)
G134855 NA non-coding upstream 344193 11744894 ~ 11767954 (-)
G134803 NA other downstream 8981 11330466 ~ 11386979 (-)
AMCG00012111 NA other downstream 434089 10934932 ~ 10961871 (-)
G134581 NA other downstream 584079 10729775 ~ 10811881 (-)
G134447 NA other downstream 1139922 10255526 ~ 10256038 (-)
G134445 NA other downstream 1144845 10250271 ~ 10251115 (-)
AMCG00012171 NA other upstream 673303 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 708839 12109540 ~ 12122725 (-)
AMCG00012174 NA other upstream 789314 12190015 ~ 12213799 (-)
G134981 NA other upstream 820504 12221205 ~ 12223185 (-)
G135146 NA other upstream 1167550 12568251 ~ 13426065 (-)

Expression



Co-expression Network