Gene
RNA
| Item | Value |
|---|---|
| gene id | G134840 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 11560097 ~ 11795338 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU169274 | True | 377 | lncRNA | 0.53 | 6 | 11560097 | 11795338 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012141 | NA | coding | downstream | 20007 | 11536026 ~ 11540090 (-) |
| AMCG00012139 | NA | coding | downstream | 171363 | 11382279 ~ 11388734 (-) |
| AMCG00012132 | NA | coding | downstream | 209160 | 11347488 ~ 11350937 (-) |
| AMCG00012129 | kat8,LOC102799453 | coding | downstream | 228816 | 11322207 ~ 11331281 (-) |
| AMCG00012130 | NA | coding | downstream | 240349 | 11312924 ~ 11319748 (-) |
| AMCG00012157 | NA | coding | upstream | 12661 | 11807999 ~ 11813611 (-) |
| AMCG00012156 | NA | coding | upstream | 47730 | 11843068 ~ 11866778 (-) |
| AMCG00012158 | NA | coding | upstream | 75899 | 11871237 ~ 11885827 (-) |
| AMCG00012160 | NA | coding | upstream | 95013 | 11890351 ~ 11896617 (-) |
| AMCG00012164 | NA | coding | upstream | 128983 | 11924321 ~ 11964818 (-) |
| G134819 | NA | non-coding | downstream | 159396 | 11395960 ~ 11400701 (-) |
| G134648 | NA | non-coding | downstream | 577306 | 10967276 ~ 10982791 (-) |
| G134451 | NA | non-coding | downstream | 1254070 | 10303569 ~ 10306027 (-) |
| G134443 | NA | non-coding | downstream | 1272968 | 10225627 ~ 10287129 (-) |
| G134404 | NA | non-coding | downstream | 1358872 | 10200802 ~ 10201225 (-) |
| G134899 | NA | non-coding | upstream | 219014 | 12014352 ~ 12017558 (-) |
| G134936 | NA | non-coding | upstream | 323002 | 12118340 ~ 12118592 (-) |
| G135002 | NA | non-coding | upstream | 471265 | 12266603 ~ 12266826 (-) |
| G135008 | NA | non-coding | upstream | 567197 | 12362535 ~ 12362840 (-) |
| G135148 | NA | non-coding | upstream | 771335 | 12566673 ~ 12589807 (-) |
| G134803 | NA | other | downstream | 173118 | 11330466 ~ 11386979 (-) |
| AMCG00012111 | NA | other | downstream | 598226 | 10934932 ~ 10961871 (-) |
| G134581 | NA | other | downstream | 748216 | 10729775 ~ 10811881 (-) |
| G134447 | NA | other | downstream | 1304059 | 10255526 ~ 10256038 (-) |
| G134445 | NA | other | downstream | 1308982 | 10250271 ~ 10251115 (-) |
| AMCG00012171 | NA | other | upstream | 278666 | 12074004 ~ 12107414 (-) |
| AMCG00012170 | NA | other | upstream | 314202 | 12109540 ~ 12122725 (-) |
| AMCG00012174 | NA | other | upstream | 394677 | 12190015 ~ 12213799 (-) |
| G134981 | NA | other | upstream | 425867 | 12221205 ~ 12223185 (-) |
| G135146 | NA | other | upstream | 772913 | 12568251 ~ 13426065 (-) |
