G134923


Basic Information

Item Value
gene id G134923
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12119231 ~ 12119660 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169378
gccccggccccggccccggccccgGCCGGCTCCGCGGCTCCCTCCCGAGCCCAAGCCCAagccgtctcctcctccaggttCTGCAGCTCCGCCGTCAGCAGCTCCCTCTGCTCCTGCTCCCGGATGATCTCGGCCTCCAGGTCCTCGAAGCATCCCTGCAGCAGCTGCGAGATCTCGGCGCTGGACTTCTCCATGTAGTCCTGGATGACCGAGGAGATCTTGCTCTCCATGTCCAGCAGCTGTAGAGCCATGGCGGAGAAGTGAGAGCGGCTCTTCGCGTTGGTGCTGTGGCCGGAAAGGGAAGTGGCGCCGCCGTGGAGCTTGTGACTTTTGCCGCGAAGTTGTTGGCTTTATAACCGAGTGAGCGCTTCTGCCGCGCTAGCGCTGCATCACAGGTATACCCCAGGACGCGCCACATGTGTTCCTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169378 True 430 lncRNA 0.65 1 12119231 12119660

Neighbor

gene id symbol gene type direction distance location
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding upstream 23292 12085358 ~ 12095939 (+)
AMCG00012161 NA coding upstream 82709 12033347 ~ 12036522 (+)
AMCG00012162 NA coding upstream 90322 11991515 ~ 12028909 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding upstream 205277 11901547 ~ 11913954 (+)
AMCG00012155 NA coding upstream 316106 11798577 ~ 11803125 (+)
AMCG00012168 NA coding downstream 12587 12132247 ~ 12141475 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding downstream 98046 12217706 ~ 12223005 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding downstream 106654 12226314 ~ 12238811 (+)
AMCG00012178 NA coding downstream 126155 12245815 ~ 12247965 (+)
AMCG00012181 NA coding downstream 278944 12398604 ~ 12403204 (+)
G134879 NA non-coding upstream 193100 11924268 ~ 11926131 (+)
G134877 NA non-coding upstream 200966 11916344 ~ 11918265 (+)
G134779 NA non-coding upstream 274399 11819257 ~ 11844832 (+)
G134766 NA non-coding upstream 352820 11711250 ~ 11766411 (+)
G134749 NA non-coding upstream 614583 11503960 ~ 11504648 (+)
G134942 NA non-coding downstream 28407 12148067 ~ 12158458 (+)
G134944 NA non-coding downstream 39558 12159218 ~ 12159429 (+)
G134945 NA non-coding downstream 40935 12160595 ~ 12161253 (+)
G134946 NA non-coding downstream 41798 12161458 ~ 12162298 (+)
G134947 NA non-coding downstream 43596 12163256 ~ 12163563 (+)
G134898 NA other upstream 87741 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 248601 11619177 ~ 11870630 (+)
G134743 NA other upstream 673068 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 825332 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 1058201 11049065 ~ 11061030 (+)
G134955 NA other downstream 52878 12172538 ~ 12172802 (+)
G134958 NA other downstream 61401 12181061 ~ 12181320 (+)
G134968 NA other downstream 71895 12191555 ~ 12192408 (+)
G135026 NA other downstream 446552 12566212 ~ 12716115 (+)
G135025 NA other downstream 494313 12613973 ~ 12648812 (+)

Expression


Co-expression Network