G134948


Basic Information

Item Value
gene id G134948
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12163655 ~ 12164196 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169406
CATCATAGCAGCTCCCTAGCGACTGCACAACACACGGTACAGCACGCTAACAGTGCCGCACACACGCCCGACACACACAGATGGAGACACACAGGCATACCATACCTTGTGTGGTGTTGAGAGGCAGTGCCAGGGTGGGGGTGCTGGCTGCGGAGTGCGTGGTGACCACACCGGCGCTGCTCTGGCTCACAGTCTGAATCACAGCCACCTGCGCCGGCTGGCTGATAAGGTGGTGTTGCCCCCCGCTGGACACCAGGTGCACTACATTCCCTGCAGCGTACGAGAGAGGGGAGTGTGAGAAAGAGCGAGACTGTGCAAGTGAGAGTGCTAGAGCTTGCatagtgtacacacacacacacacacacagactgactgacccTGCACTGGGCGTGGCTGCCCCATGTTGACCTGGTGCACCTGCGCTCCGGACAGGGTCAGCTTGTTGCCCTGCAGCTGGAAGGTGACGGGTTTGCTGCCCTGAGATGTCTGGACTGGGCGGCCGGCCAGGGAGGCCAGCTGGGCAATACTGACCACCTCGCCCG

Function

NR:

description
PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169406 True 542 lncRNA 0.61 1 12163655 12164196

Neighbor

gene id symbol gene type direction distance location
AMCG00012168 NA coding upstream 22180 12132247 ~ 12141475 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding upstream 67716 12085358 ~ 12095939 (+)
AMCG00012161 NA coding upstream 127133 12033347 ~ 12036522 (+)
AMCG00012162 NA coding upstream 134746 11991515 ~ 12028909 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding upstream 249701 11901547 ~ 11913954 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding downstream 53510 12217706 ~ 12223005 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding downstream 62118 12226314 ~ 12238811 (+)
AMCG00012178 NA coding downstream 81619 12245815 ~ 12247965 (+)
AMCG00012181 NA coding downstream 234408 12398604 ~ 12403204 (+)
AMCG00012182 NA coding downstream 285515 12449711 ~ 12453677 (+)
G134947 NA non-coding upstream 92 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 1357 12161458 ~ 12162298 (+)
G134945 NA non-coding upstream 2402 12160595 ~ 12161253 (+)
G134944 NA non-coding upstream 4226 12159218 ~ 12159429 (+)
G134942 NA non-coding upstream 5197 12148067 ~ 12158458 (+)
G135005 LOC104962440 non-coding downstream 195801 12359997 ~ 12360317 (+)
G135007 NA non-coding downstream 198349 12362545 ~ 12362843 (+)
G135030 NA non-coding downstream 447969 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 472503 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 528472 12692668 ~ 12693815 (+)
G134898 NA other upstream 132165 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 293025 11619177 ~ 11870630 (+)
G134743 NA other upstream 717492 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 869756 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 1102625 11049065 ~ 11061030 (+)
G134955 NA other downstream 8342 12172538 ~ 12172802 (+)
G134958 NA other downstream 16865 12181061 ~ 12181320 (+)
G134968 NA other downstream 27359 12191555 ~ 12192408 (+)
G135026 NA other downstream 402016 12566212 ~ 12716115 (+)
G135025 NA other downstream 449777 12613973 ~ 12648812 (+)

Expression


Co-expression Network