G135028


Basic Information

Item Value
gene id G135028
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12692668 ~ 12693815 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169517
CTCCATGCAGCTGCACGCTGGCCCTCAGTGTCCCTCCACTCTGAAGGAGGTCAGACCTGGCTGGATGCAGGTCAGAGGGCCAGTACCCTGAGCCTGCAGTGATCtggacagacagggacagacaTGACGTCACATCACTGTCCAGCACCACAGTGAAGATGGACAGTCAGGAGCGTCTCACTGTCAGCAGCTTCATCCCAGTCAGACAGGAGTCCAGTGTCTTCATCTGCCTGATTAGAAGTCCAGAACCTAAAATAGACTGGGAAGCCCAACTGCACATACCCAGGGACTTCTTCCCTGACCCCTCTGGGTGGATGGTGTCTTTATTCTCACTGTGGCAGCACATCCAGTGCTGATCCAGTGGAGACGAATGGACAGTGAGTGTCTGGATGCTTGTGTGGCATTTCATGAGTTACATAGA

Function

GO: NA

KEGG:

id description
ko03410 Base excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU169517 True 421 lncRNA 0.54 3 12692668 12693815

Neighbor

gene id symbol gene type direction distance location
AMCG00012192 NA coding upstream 38352 12651153 ~ 12654316 (+)
AMCG00012198 NA coding upstream 69587 12621011 ~ 12623081 (+)
AMCG00012186 NA coding upstream 101296 12588930 ~ 12591372 (+)
AMCG00012190 NA coding upstream 123668 12566641 ~ 12569000 (+)
AMCG00012189 NA coding upstream 144024 12541835 ~ 12548644 (+)
AMCG00012193 NA coding downstream 64206 12758021 ~ 12758746 (+)
AMCG00012194 NA coding downstream 68809 12762624 ~ 12763676 (+)
AMCG00012199 NA coding downstream 93585 12787400 ~ 12788020 (+)
AMCG00012200 NA coding downstream 96712 12790527 ~ 12799451 (+)
AMCG00012206 NA coding downstream 339293 13033108 ~ 13065375 (+)
G135030 NA non-coding upstream 44055 12612165 ~ 12648613 (+)
G135007 NA non-coding upstream 329825 12362545 ~ 12362843 (+)
G135005 LOC104962440 non-coding upstream 332351 12359997 ~ 12360317 (+)
G134948 NA non-coding upstream 528472 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 529105 12163256 ~ 12163563 (+)
G135033 NA non-coding downstream 26047 12719862 ~ 12721164 (+)
G135045 NA non-coding downstream 142437 12836252 ~ 12840315 (+)
G135051 NA non-coding downstream 179403 12873218 ~ 12895581 (+)
G135053 NA non-coding downstream 195955 12889770 ~ 12901593 (+)
G135055 NA non-coding downstream 203215 12897030 ~ 12897756 (+)
G135025 NA other upstream 43856 12613973 ~ 12648812 (+)
G134968 NA other upstream 500260 12191555 ~ 12192408 (+)
G134958 NA other upstream 511348 12181061 ~ 12181320 (+)
G134955 NA other upstream 519866 12172538 ~ 12172802 (+)
G134898 NA other upstream 661178 12030897 ~ 12031490 (+)
AMCG00012191 NA other downstream 8508 12702323 ~ 12724194 (+)
G135037 NA other downstream 76968 12770783 ~ 12777157 (+)
G135038 NA other downstream 90273 12784088 ~ 12786060 (+)
G135070 NA other downstream 274562 12968377 ~ 12974053 (+)
AMCG00012217 NA other downstream 575381 13269196 ~ 13276971 (+)

Expression


Co-expression Network