G135058


Basic Information

Item Value
gene id G135058
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13422435 ~ 13425359 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169557
ACTCAGTGTGTGACAATGGATTCAGTGTGAAGAAGTACAGCTGTGACAGATCTCGGTTCATTCACACTTTATTTGGGCTTTAAGTTCTCACGCTCATGGAAAGTCACATTAGATAATTTTCCTCAGAAGCATGAACATCATTTAATGTCTGTAAATTGTCTTCTCGTGGTGACAGAGGGGAGGGACTTCAGCTGTGAGCTCTGTGTCCTCCTCCCAGCGCAGGGCTGATAATAATGGCGTCTCTGTACGGCTCAGACAGGAGTGTTGATGCAGATGGGCAGTTGGGCTCTGAGGACCAAGTCAAGCCCTTGCAAAGGCTGTAAAAAAATCACCCGAGGTTATGGCACTTCATCGTTCTTTTTCCCTGTCTGCGATCGGGCCACTACTCAGTTCTCTGATTTCATCCAAAGCCAGCAATCCAGGGTCATCATTGTGAGTAAGAGTCATCATTGTCCAGTGCAGGTCAGGTCACAGATCGGGGTCTCAAATCCaaagcgggggggggggttgcattACCCTTCCATACTAATGTCTGATGAGACATAGGGAGGCACTTCATCTGCAAATAGTGCCAATCATTAACTGCTCCCCATGGGGTGTCACACATGATACTGATCACACAGGGACACATCAGCTGATTGTTTTACTGGGAAAAGGATTTGTATATCGATATTATTCCTGCTGTGTGCACAGTGAGTCTGCGGTGGGGTATTTACCCGTGATACCGGAGCCCTCCTACCAGGGGCAACACCAGGGTAGTTCTTGGCGTGGTGGGTGTCCCCCTAAATCTATCCACCTCCCTGCAGCCAGTAAATATATCAACCACAATACGCTGCCCTTTTGTTtcggggaaaaaaaatcaccaaatCTCCAGCAAACACTTTCAAATGGAAACGCCTCCCTCGAAATCCATGTCTAAGTCAACCCATGCAGTATAAATTGATGTACCTGTACTTCTCTctgttataaaaaaacaaaccgcaacaaacatttttattccagCCTTCACCAGAGACTCACAGGATAACTGTTAAACAGGTCTGGCTCatgattaaaatcaataaataagtcaTTATATCTGCATCTGTATTGTATGCAGTTAACTGAAAGCCTTTCTCTCTGAATTTTACATTCATCTTgggttaattaattgaatgaaatgaaaaagtaaagacTGATATGTTgagtagaagagaaacaagCGGTGCTAGTTGTAATGCAGGTACAATgcaagtgtgtcagtgtgtccagCAGCTGCTGTGCTGAGCCGATGGACTCGGGTTCAGGTTTGGGAAGCAGCTCAGTGATCTGCGCAGATGGATGCATGTTTGGATGTCAATAAGTTTTATTTCACCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169557 True 1359 TUCP 0.45 2 13422435 13425359

Neighbor

gene id symbol gene type direction distance location
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding upstream 99046 13317915 ~ 13323389 (+)
AMCG00012223 NA coding upstream 114912 13303056 ~ 13307523 (+)
AMCG00012218 NA coding upstream 220043 13187382 ~ 13202392 (+)
AMCG00012212 NA coding upstream 239605 13166600 ~ 13182830 (+)
AMCG00012213 NA coding upstream 273861 13144427 ~ 13148574 (+)
AMCG00012227 NA coding downstream 100325 13525684 ~ 13527970 (+)
AMCG00012236 NA coding downstream 115794 13541153 ~ 13543947 (+)
AMCG00012229 pelo,LOC107674509 coding downstream 124695 13550054 ~ 13556902 (+)
AMCG00012242 NA coding downstream 270731 13696090 ~ 13700551 (+)
AMCG00012241 NA coding downstream 315880 13741239 ~ 13743991 (+)
G135137 NA non-coding upstream 1384 13417405 ~ 13421051 (+)
G135131 NA non-coding upstream 24799 13372603 ~ 13397636 (+)
G135117 NA non-coding upstream 124235 13287666 ~ 13298200 (+)
G135110 NA non-coding upstream 160381 13261759 ~ 13262054 (+)
G135067 NA non-coding upstream 174710 12959748 ~ 13247725 (+)
G135138 NA non-coding downstream 1992 13427351 ~ 13427999 (+)
G135226 NA non-coding downstream 52203 13477562 ~ 13484478 (+)
G135250 NA non-coding downstream 105413 13530772 ~ 13531293 (+)
G135255 NA non-coding downstream 107339 13532698 ~ 13625360 (+)
G135257 NA non-coding downstream 111887 13537246 ~ 13541117 (+)
AMCG00012217 NA other upstream 145464 13269196 ~ 13276971 (+)
G135070 NA other upstream 448382 12968377 ~ 12974053 (+)
G135038 NA other upstream 636375 12784088 ~ 12786060 (+)
G135037 NA other upstream 645278 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 698241 12702323 ~ 12724194 (+)
AMCG00012228 NA other downstream 45742 13471101 ~ 13508799 (+)
G135240 NA other downstream 94062 13519421 ~ 13520494 (+)
G135264 NA other downstream 158911 13584270 ~ 13585916 (+)
AMCG00012245 NA other downstream 381854 13807213 ~ 13817545 (+)
AMCG00012247 NA other downstream 425019 13850378 ~ 13855055 (+)

Expression


Co-expression Network