G135137


Basic Information

Item Value
gene id G135137
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13417405 ~ 13421051 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169673
ATCATTGTTAAATCGACGTTCTAATGTCTCAAACACCAGTCAATATCCGTCTCCCAAAACCTCACAACATAACTGTCATGGTTTTAAGCCATCGCCCTCtatctccactagaggccgctgtcTTCCCTGTCTGTCCTTTCCCCTTATTGTTCTCTTTTCACCTatcaatcacccaattaacattgctccacacccttgtgcacttctgctcctgtcctccgTTTCCATTGGCTCTGCACCTTTCTTCCCTGTTCCTGCTCCttgtcttaaacccctcactgccctcacacGGGGCGAAGTCTCGTCAGCACAGCTTACGACGCTGAGTCCTGTTTCCGCCCCTCTGATCACGACTCTGCCTTGCCTCTCTTGCCCTGATctgccggtacccgacccacgccttcCCGACGATCCCTCGATCCAGCATTGCACCTGGGTCctctgttcccgagcccccgaggCACACGTGACAATAACACTTACCCCAGACTCTGTGAAGACCTGAAAATATGAGAAGACAATCCATTACACTCTCAGACATCAGTGACAATGACAGCTTTAATATCCTACCATGCTGTCCTCCCAATCTGGATTTCATACAAAAGCAGAAACTGAGGAGAAACCTAATTTTCCTTGTTTAGGAACCAgaaatactgtatgtttactAACTTCAGTTctaactttgttttaaaaaagtactaaagttaattttaaactctttacataaaacattgttAGATGTTATATAGTTCACTATAGTTCTCTGTAAGAAAAGACTAGAGTGATGCCCTTTTCAGAAGCTGTAGTACAATAGTTAAGAGagtaattacagaaaacaattccACCATTTATTAAGTTACTTACCCTTGAACAGccacattttctctttctctgcaaACAGACACAAGGAGTGGAATCAATAACTCAATACAGCGATTTCATGTTCAGCACAGAAAgtgattttaattgattaattggggAGTTATTTAGAGAATTGTATTCCCCTTTAGAAAACCATTTGTTACCCGAGAATGTGCactgtgtaataataatgtgtgcttgtgtgacGGGCTGCGGCGCCCCTGTGTTAGAGGCACAATTATGAGTGCCGCCGAGttgatgattgattgattgattgacaggtATGTGTTTTTTGTCCTTCACCTCAAGGCACGGTCAATCGATCTGTTGGCTCCCAGACAAACCACACCACTGCACAATGTGAGTGAGGGGCTCCACTGGGTTTGgtcacagcagcacacacttGTTGGCTGTCCTGCTTTATGTGGAtatgctttgtatttgtttattacaaCCACTGTTCTatgtttctttggttttgtgtttaaaggGCAGGAATCCTGATTTTATTGACAATAAATCTGTGGTTTCACCATAANNNNNNNNNNNNNNNGCCTCTTTGGAACCCACCTTGACTACCATCCACATCatgtatgtgtattgtttttcatactCCTGATATATTGTccttatactgtatgttttttggtTGGTACAGGTATGGGATACTCTGGGTACTCATTGGGTTTTAATATACCAGGGTATTTTTAATACTCGAGAACctttataaatgtgtgaaataacaGTTTGTAAACATGTCTCTAGCAGTGGGAAGCACCTGGGTGTAAAGGGTTACTGAAGAACTGCAtgctttccctgtgtgtctatGTAATACGAGGAGGGCCTTACTGTGTTACTGCGCCATAGTTCAACTCCGAAGAACAGGGTTTGACAAGAAACAGTTTTTACGATCTGTTTTGGGTTAATATATCATATGAAGCCCTATCATTCACCCTACACGTGTCTGGATTATTTCCGACTCTTCAATTACCGTAACtctccaacaacaacaaaatcacaatttGCCCCCAGATGATCATGAGAAACACTCCTCCACTGTCACAGATCAAAAATGGTCGGAGGAGACTGGGGCTTCTACAGTGTGGGATTTTCATCAGTGATGGCAAAGACAACTGTTCAGGGGTGACAGTGGTTCTGCCTGGAAGTGGTTCTGTCTGTCACTCAATTAACATGTTCCAGCAAACCTCAGCTTGAGAAGATGCTGCCCTGTAATCAACAGCTCTCAATACACTGACTGGACTATGGTCCACTGGGAAAATGTGAGATGTCGTATGATTGCATGATGCAGTACCAGGCAGCGTGGCGAACGACCGCCCCGTGAAGCTTCGGCACTCCCTGAATCCAGGTGGGGTGATTTACCCGGAGTCCAATTACCTGCTCGCCTCCTcgataaaataaagacatttgagACTTCTCCttgtggagaggcaggaggacAGCCGGGGAGATGAGCTGGAGAGTTTTGTTACAAGTGTTAAGAGAAGGATTGGATTTGATCAAACGGAACTGTGCATTGAACTGACGATGGCTTTGGTTTGTGGACAAAACTTGGTTGCTGTGCTTGTGTTTATAATCATTAGTATAAAGAGGGACTTGTTATATGTTTAGTTTAGACTCAATTAAGAGTTAGGTTTTGCTCTGGTTTGTAGTTTGATTGAAGCACcgtctgtattttaaataaatcaccacGTTTGCACTCATTTCACTTACAGTTTCCTGAGCCCCGCCTTACAGAGCCCCGACAGTGTGGACACAACCCCTTACACTGTCACAATTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169673 True 2662 lncRNA 0.43 2 13417405 13421051

Neighbor

gene id symbol gene type direction distance location
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding upstream 94016 13317915 ~ 13323389 (+)
AMCG00012223 NA coding upstream 109882 13303056 ~ 13307523 (+)
AMCG00012218 NA coding upstream 215013 13187382 ~ 13202392 (+)
AMCG00012212 NA coding upstream 234575 13166600 ~ 13182830 (+)
AMCG00012213 NA coding upstream 268831 13144427 ~ 13148574 (+)
AMCG00012227 NA coding downstream 104633 13525684 ~ 13527970 (+)
AMCG00012236 NA coding downstream 120102 13541153 ~ 13543947 (+)
AMCG00012229 pelo,LOC107674509 coding downstream 129003 13550054 ~ 13556902 (+)
AMCG00012242 NA coding downstream 275039 13696090 ~ 13700551 (+)
AMCG00012241 NA coding downstream 320188 13741239 ~ 13743991 (+)
G135131 NA non-coding upstream 19769 13372603 ~ 13397636 (+)
G135117 NA non-coding upstream 119205 13287666 ~ 13298200 (+)
G135110 NA non-coding upstream 155351 13261759 ~ 13262054 (+)
G135097 NA non-coding upstream 201045 13212674 ~ 13216360 (+)
G135073 NA non-coding upstream 431263 12985507 ~ 12986142 (+)
G135138 NA non-coding downstream 6300 13427351 ~ 13427999 (+)
G135226 NA non-coding downstream 56511 13477562 ~ 13484478 (+)
G135250 NA non-coding downstream 109721 13530772 ~ 13531293 (+)
G135255 NA non-coding downstream 111647 13532698 ~ 13625360 (+)
G135257 NA non-coding downstream 116195 13537246 ~ 13541117 (+)
AMCG00012217 NA other upstream 140434 13269196 ~ 13276971 (+)
G135070 NA other upstream 443352 12968377 ~ 12974053 (+)
G135038 NA other upstream 631345 12784088 ~ 12786060 (+)
G135037 NA other upstream 640248 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 693211 12702323 ~ 12724194 (+)
G135058 NA other downstream 1384 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 50050 13471101 ~ 13508799 (+)
G135240 NA other downstream 98370 13519421 ~ 13520494 (+)
G135264 NA other downstream 163219 13584270 ~ 13585916 (+)
AMCG00012245 NA other downstream 386162 13807213 ~ 13817545 (+)

Expression


Co-expression Network