Gene
RNA
| Item | Value |
|---|---|
| gene id | G135161 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 12863860 ~ 12952125 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU169746 | True | 539 | lncRNA | 0.32 | 2 | 12863860 | 12952125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012201 | NA | coding | downstream | 38107 | 12806962 ~ 12825753 (-) |
| AMCG00012195 | NA | coding | downstream | 107513 | 12721237 ~ 12756347 (-) |
| AMCG00012188 | NA | coding | downstream | 222248 | 12633737 ~ 12641612 (-) |
| AMCG00012185 | NA | coding | downstream | 359355 | 12483528 ~ 12504505 (-) |
| AMCG00012184 | NA | coding | downstream | 423388 | 12434496 ~ 12440472 (-) |
| AMCG00012203 | NA | coding | upstream | 2880 | 12955005 ~ 12960892 (-) |
| AMCG00012208 | NA | coding | upstream | 30204 | 12982329 ~ 12992699 (-) |
| AMCG00012215 | NA | coding | upstream | 130298 | 13082423 ~ 13084065 (-) |
| AMCG00012216 | NA | coding | upstream | 135848 | 13087973 ~ 13101374 (-) |
| AMCG00012214 | NA | coding | upstream | 183618 | 13135743 ~ 13143480 (-) |
| G135160 | NA | non-coding | downstream | 23547 | 12792948 ~ 12840313 (-) |
| G135151 | NA | non-coding | downstream | 231801 | 12578865 ~ 12632059 (-) |
| G135148 | NA | non-coding | downstream | 274053 | 12566673 ~ 12589807 (-) |
| G135008 | NA | non-coding | downstream | 501020 | 12362535 ~ 12362840 (-) |
| G135002 | NA | non-coding | downstream | 597034 | 12266603 ~ 12266826 (-) |
| G135184 | NA | non-coding | upstream | 198390 | 13150515 ~ 13214542 (-) |
| G135193 | NA | non-coding | upstream | 318687 | 13270812 ~ 13279294 (-) |
| G135202 | NA | non-coding | upstream | 369606 | 13321731 ~ 13329044 (-) |
| G135217 | NA | non-coding | upstream | 465280 | 13417405 ~ 13418804 (-) |
| G135333 | NA | non-coding | upstream | 799785 | 13751910 ~ 13818084 (-) |
| AMCG00012197 | znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 | other | downstream | 61792 | 12764572 ~ 12802068 (-) |
| G135152 | NA | other | downstream | 160375 | 12702450 ~ 12703485 (-) |
| AMCG00012196 | NA | other | downstream | 163130 | 12637093 ~ 12700730 (-) |
| G134981 | NA | other | downstream | 640675 | 12221205 ~ 12223185 (-) |
| AMCG00012174 | NA | other | downstream | 650061 | 12190015 ~ 12213799 (-) |
| G135172 | NA | other | upstream | 130096 | 13082221 ~ 13101480 (-) |
| AMCG00012222 | NA | other | upstream | 279497 | 13231622 ~ 13232389 (-) |
| AMCG00012226 | cd2bp2 | other | upstream | 344294 | 13296419 ~ 13300421 (-) |
| AMCG00012233 | NA | other | upstream | 567541 | 13519666 ~ 13524815 (-) |
| AMCG00012238 | NA | other | upstream | 658361 | 13610486 ~ 13667607 (-) |
