G135250


Basic Information

Item Value
gene id G135250
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13530772 ~ 13531293 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169884
gTATGGTCCCTCTGTCCAGGCGGAATCGCTCCTTGAACTGGCGGCCGGTCAGGGAGTCGGTGTGACATGGCCTCCTACACCCCCGCCTGGCCCCCTGGGTCAGGGCTGCCTCCAGCAGGGCCTCCAGCTCCCGCTCCCCCTGCAGCCCCCAGGCTGGCCCCGCCTGTTCCTCCCGCAAGAGCTCCATCACCGCCTGCCCTGCAGCCACCACACACAGGGCCTGGGCCATCACGCCCTGGGGGACAGACACAGAGGTGGTACAGTGGCACTCCCATctagtcagtgactctgcagcagtccagtccagtccagtccagtcagtgactctgcagcagtccagtccagtccagtccagtcagtgactctgcagcagtccagtccagtccagtccagtcagtgactctgcagcagtccagtccagtccagtcagtga
>TU169885
gTATGGTCCCTCTGTCCAGGCGGAATCGCTCCTTGAACTGGCGGCCGGTCAGGGAGTCGGTGTGACATGGCCTCCTACACCCCCGCCTGGCCCCCTGGGTCAGGGCTGCCTCCAGCAGGGCCTCCAGCTCCCGCTCCCCCTGCAGCCCCCAGGCTGGCCCCGCCTGTTCCTCCCGCAAGAGCTCCATCACCGCCTGCCCTGCAGCCACCACACACAGGGCCTGGGCCATCACGCCCTGGGGGACAGACACAGAGGTGGTACAGTGGCACTCCCATctagtcagtgactctgcagcagtccagtccagtccagtccagtcagtgactctgcagcagtccagtccagtccagtccagtcagtgactctgcagcagtccagtccagtccagtcagtgactctgcagcagtccagtccagttcagtcagtgactctgcagcagtccagtccagtccagtcagtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169884 False 433 lncRNA 0.65 2 13530772 13531293
TU169885 True 461 lncRNA 0.64 2 13530772 13531293

Neighbor

gene id symbol gene type direction distance location
AMCG00012227 NA coding upstream 2802 13525684 ~ 13527970 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding upstream 207383 13317915 ~ 13323389 (+)
AMCG00012223 NA coding upstream 223249 13303056 ~ 13307523 (+)
AMCG00012218 NA coding upstream 328380 13187382 ~ 13202392 (+)
AMCG00012212 NA coding upstream 347942 13166600 ~ 13182830 (+)
AMCG00012236 NA coding downstream 9860 13541153 ~ 13543947 (+)
AMCG00012229 pelo,LOC107674509 coding downstream 18761 13550054 ~ 13556902 (+)
AMCG00012242 NA coding downstream 164797 13696090 ~ 13700551 (+)
AMCG00012241 NA coding downstream 209946 13741239 ~ 13743991 (+)
AMCG00012243 NA coding downstream 256087 13787380 ~ 13788233 (+)
G135226 NA non-coding upstream 46294 13477562 ~ 13484478 (+)
G135138 NA non-coding upstream 102773 13427351 ~ 13427999 (+)
G135137 NA non-coding upstream 109721 13417405 ~ 13421051 (+)
G135131 NA non-coding upstream 133136 13372603 ~ 13397636 (+)
G135117 NA non-coding upstream 232572 13287666 ~ 13298200 (+)
G135255 NA non-coding downstream 1405 13532698 ~ 13625360 (+)
G135257 NA non-coding downstream 5953 13537246 ~ 13541117 (+)
G135280 NA non-coding downstream 134341 13665634 ~ 13665881 (+)
G135282 NA non-coding downstream 140821 13672114 ~ 13673799 (+)
G135358 NA non-coding downstream 371014 13902307 ~ 13904536 (+)
G135240 NA other upstream 10278 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 21973 13471101 ~ 13508799 (+)
G135058 NA other upstream 105413 13422435 ~ 13425359 (+)
AMCG00012217 NA other upstream 253801 13269196 ~ 13276971 (+)
G135070 NA other upstream 556719 12968377 ~ 12974053 (+)
G135264 NA other downstream 52977 13584270 ~ 13585916 (+)
AMCG00012245 NA other downstream 275920 13807213 ~ 13817545 (+)
AMCG00012247 NA other downstream 319085 13850378 ~ 13855055 (+)
AMCG00012253 NA other downstream 530944 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 642620 14173913 ~ 14183167 (+)

Expression


Co-expression Network