G135280


Basic Information

Item Value
gene id G135280
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13665634 ~ 13665881 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169924
cagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgagggtgacgtttggcaacttgaaccttcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169924 True 248 lncRNA 0.43 1 13665634 13665881

Neighbor

gene id symbol gene type direction distance location
AMCG00012229 pelo,LOC107674509 coding upstream 108732 13550054 ~ 13556902 (+)
AMCG00012236 NA coding upstream 121687 13541153 ~ 13543947 (+)
AMCG00012227 NA coding upstream 137664 13525684 ~ 13527970 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding upstream 342245 13317915 ~ 13323389 (+)
AMCG00012223 NA coding upstream 358111 13303056 ~ 13307523 (+)
AMCG00012242 NA coding downstream 30209 13696090 ~ 13700551 (+)
AMCG00012241 NA coding downstream 75358 13741239 ~ 13743991 (+)
AMCG00012243 NA coding downstream 121499 13787380 ~ 13788233 (+)
AMCG00012249 NA coding downstream 165700 13831581 ~ 13836820 (+)
AMCG00012248 coro1c,LOC106937262,LOC105025598 coding downstream 172574 13838455 ~ 13841993 (+)
G135255 NA non-coding upstream 40274 13532698 ~ 13625360 (+)
G135257 NA non-coding upstream 124517 13537246 ~ 13541117 (+)
G135250 NA non-coding upstream 134341 13530772 ~ 13531293 (+)
G135226 NA non-coding upstream 181156 13477562 ~ 13484478 (+)
G135138 NA non-coding upstream 237635 13427351 ~ 13427999 (+)
G135282 NA non-coding downstream 6233 13672114 ~ 13673799 (+)
G135358 NA non-coding downstream 236426 13902307 ~ 13904536 (+)
G135359 NA non-coding downstream 238835 13904716 ~ 13905291 (+)
G135355 NA non-coding downstream 239594 13905475 ~ 13906347 (+)
G135366 NA non-coding downstream 262107 13927988 ~ 13956305 (+)
G135264 NA other upstream 79718 13584270 ~ 13585916 (+)
G135240 NA other upstream 145140 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 156835 13471101 ~ 13508799 (+)
G135058 NA other upstream 240275 13422435 ~ 13425359 (+)
AMCG00012217 NA other upstream 388663 13269196 ~ 13276971 (+)
AMCG00012245 NA other downstream 141332 13807213 ~ 13817545 (+)
AMCG00012247 NA other downstream 184497 13850378 ~ 13855055 (+)
AMCG00012253 NA other downstream 396356 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 508032 14173913 ~ 14183167 (+)
AMCG00012268 NA other downstream 580882 14246763 ~ 14296659 (+)

Expression


Co-expression Network