G135506


Basic Information

Item Value
gene id G135506
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14226990 ~ 14232263 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170228
CGATGATGTCAGTTATGCCCAGCCCCAGCTTGGTCGCTGTGGCGTCGACAGGAAGTTCCACCTCCTTCCGCAGCAGCAGGATGCGGGAGGGCGGGACCTGGAGTTTGAGTGACAGCTGCTCCACGGCCTCACTCAGGGGAGATGTCTGCCAATTAAAACAGGCAATTGACAGTTTAACTCAATGAATGAAACGCAGAGACACTGACCGCTAGTGTGGGCGTCTATACCTTATTAACCCCTCTCCCCCAACTCTCCATCTTACTGATTGAATGGGGATCTTGAACAGGTCGGTGCGGCTACGGAACTTCAGTACGATCTCCCTCGGCGAATCAGAGTCCAGGGCCTCCGTCCTGGGGGAGGAGACAATGATGATATCATCGTCGTCATCAGAGATGGCGGCCCTCCTCACTTCCTGCTGTGGAGACAGCAGAGAGCCGATCGCATTCAACCTCCTGTTGatctccctgagagagagagagagaacgtcTTCAAGCACAGAGAGGAGTTTGAAGATATAAGGATTGGCTTGATGCAGATTCTTACAAGAAATTACAGCACAAGAAAaaagacagatggacagaggcacagagagagagagagagagaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170228 True 608 lncRNA 0.52 2 14226990 14232263

Neighbor

gene id symbol gene type direction distance location
AMCG00012263 NA coding upstream 26995 14186727 ~ 14199995 (+)
AMCG00012260 NA coding upstream 109021 14100100 ~ 14117969 (+)
AMCG00012251 NA coding upstream 169436 14048952 ~ 14057554 (+)
AMCG00012252 LOC107755578,LOC107690283,LOC107729173,LOC107590562,LOC107567734 coding upstream 237824 13984464 ~ 13989166 (+)
AMCG00012254 NA coding upstream 244221 13979470 ~ 13982769 (+)
AMCG00012273 NA coding downstream 80024 14312287 ~ 14314436 (+)
AMCG00012266 NA coding downstream 105610 14337873 ~ 14372596 (+)
AMCG00012276 NA coding downstream 166850 14399113 ~ 14410440 (+)
AMCG00012274 NA coding downstream 183744 14416007 ~ 14423640 (+)
AMCG00012277 NA coding downstream 195696 14427959 ~ 14434886 (+)
G135366 NA non-coding upstream 270685 13927988 ~ 13956305 (+)
G135356 NA non-coding upstream 278163 13946316 ~ 13948827 (+)
G135355 NA non-coding upstream 320643 13905475 ~ 13906347 (+)
G135359 NA non-coding upstream 321699 13904716 ~ 13905291 (+)
G135358 NA non-coding upstream 322454 13902307 ~ 13904536 (+)
G135540 NA non-coding downstream 135786 14368049 ~ 14368337 (+)
G135542 NA non-coding downstream 140777 14373040 ~ 14373945 (+)
G135575 NA non-coding downstream 285953 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 303261 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 331313 14563576 ~ 14576998 (+)
AMCG00012262 LOC104967735 other upstream 43823 14173913 ~ 14183167 (+)
AMCG00012253 NA other upstream 131193 14062237 ~ 14095797 (+)
AMCG00012247 NA other upstream 371935 13850378 ~ 13855055 (+)
AMCG00012245 NA other upstream 409445 13807213 ~ 13817545 (+)
G135264 NA other upstream 641074 13584270 ~ 13585916 (+)
AMCG00012268 NA other downstream 14500 14246763 ~ 14296659 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other downstream 143370 14375633 ~ 14377651 (+)
G135544 NA other downstream 145409 14377672 ~ 14378695 (+)
AMCG00012267 NA other downstream 155775 14388038 ~ 14389685 (+)
G135566 NA other downstream 202702 14434965 ~ 14435728 (+)

Expression


Co-expression Network