G135542


Basic Information

Item Value
gene id G135542
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14373040 ~ 14373945 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170270
GTTGGAGCAGCAGTAGATAAAGTTGTAGCAGCTACAAAAATATCTGTAGTCGTGGTAGAAGCAGACATACCAGAAATTATATCAATAGCAGTCGTTATAGCCGCATCAGTCATATGAACTCAGTAAGTGGCCATAGAAGAACCCTCTTCAACAGCGCTAGTGTCAGCCAGGGACACCTGAACCCATACAGTTTGAAACAGTGCCGTCCCTGAGCTCGACAATTGCAGTGTTATTGTGTAGTGGATTTCTTCTCCGTCATCCAAAGAGACACAGGATGCAGGTTGATGATCAGCTCCAGATACTTTATTCAGTGCAAACAAAGGAAGATCCACCTCTCAAACCTGTCTCAGTGTTTTAACccccgctctccctctctcagtgtgACAGTGCGTACAGCAGTGTGGCTGCCTGCTCTATTCTATCTCTGTACTCTAGATGGCAGTAGTTCCCCGGGGGCACCCCCTCCAGGCCGTGCAGCAGCCCCCAGCAGCACCCGGCCACCACTGCGGTAGAGTCACTGTCTCctgcacagagagggagagagaagagagaaagagagggagagggaagCTCCATGAAAGGCTGCCCGACTCATCAGCTCCTCCCAGTCTGGCCCCGACCCCAGCAGAGCATCCAGCGCAATCATTGGTGCGTCGTGTCCGCTGCGCCCCGCCCACCCGGATAGGCTGAAGCTCCGATAGGCCAGGTCCCTCTCGGCCGGCCCATACGGGGTGGGCCAGCACACAGGTCCCACCCCTGAGGAGAGACCACGCTCTGAGAgatacctgagagagagagagagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170270 True 805 lncRNA 0.55 2 14373040 14373945

Neighbor

gene id symbol gene type direction distance location
AMCG00012266 NA coding upstream 444 14337873 ~ 14372596 (+)
AMCG00012273 NA coding upstream 58604 14312287 ~ 14314436 (+)
AMCG00012263 NA coding upstream 173045 14186727 ~ 14199995 (+)
AMCG00012260 NA coding upstream 255071 14100100 ~ 14117969 (+)
AMCG00012251 NA coding upstream 315486 14048952 ~ 14057554 (+)
AMCG00012276 NA coding downstream 25168 14399113 ~ 14410440 (+)
AMCG00012274 NA coding downstream 42062 14416007 ~ 14423640 (+)
AMCG00012277 NA coding downstream 54014 14427959 ~ 14434886 (+)
AMCG00012278 NA coding downstream 64763 14438708 ~ 14443094 (+)
AMCG00012275 NA coding downstream 71119 14445064 ~ 14452229 (+)
G135540 NA non-coding upstream 4703 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 140777 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 416735 13927988 ~ 13956305 (+)
G135356 NA non-coding upstream 424213 13946316 ~ 13948827 (+)
G135355 NA non-coding upstream 466693 13905475 ~ 13906347 (+)
G135575 NA non-coding downstream 144271 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 161579 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 189631 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 196430 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 223185 14597130 ~ 14601583 (+)
AMCG00012268 NA other upstream 76381 14246763 ~ 14296659 (+)
AMCG00012262 LOC104967735 other upstream 189873 14173913 ~ 14183167 (+)
AMCG00012253 NA other upstream 277243 14062237 ~ 14095797 (+)
AMCG00012247 NA other upstream 517985 13850378 ~ 13855055 (+)
AMCG00012245 NA other upstream 555495 13807213 ~ 13817545 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other downstream 1688 14375633 ~ 14377651 (+)
G135544 NA other downstream 3727 14377672 ~ 14378695 (+)
AMCG00012267 NA other downstream 14093 14388038 ~ 14389685 (+)
G135566 NA other downstream 61020 14434965 ~ 14435728 (+)
G135573 NA other downstream 210179 14584124 ~ 14585770 (+)

Expression


Co-expression Network