G135544


Basic Information

Item Value
gene id G135544
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14377672 ~ 14378695 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170274
GTGAGGTCTATACATGTGGTTTCTTAATCTAGATTATGTGAATCACTatatggaatgttttttttttattaatcttatGTATTTTCTTACTTATAATTGATATTCCCATATTTATAGATTTCCCTGCATCTGCCATTATTAATATACtaatccccccacacacacctctgTTTCTGAGGCACAAAAGCATTGGGACCAAAATTGtagaaaaaaggttttatttgttcaaaCAATCATATCAATCCTCAGCCGCTTCACAGACCTATTCCAGACTgacaatgaaacaaatacaaagccAACGGGGGAGACACGCACGATACAGGCAGGGAGTGACAGATAGAAAAACAGACaaccacactctctctctgtgcgcacactctgtctctctcactctatacacacactgtgcacacacacactctctcactctatacacacactgtgcacacacacactctctcactctatacacacactgtgcacacacacacactctctcactctggTCACATTCACTTCTTCTTGTTCTCCTTGCATGCCACGACGTATCTCTGCGCCACGTTGAGGGGGGGGGAGTAGCCGTCAGCGTAGGAGGTGTCCTCGAAAAGTACCGAGTAATCATCctgaggctgagagagagagagagagagaggtggggggttaataca
>TU170275
GTGAGGTCTATACATGTGGTTTCTTAATCTAGATTATGTGAATCACTatatggaatgttttttttttattaatcttatGTATTTTCTTACTTATAATTGATATTCCCATATTTATAGATTTCCCTGCATCTGCCATTATTAATATACtaatccccccacacacacctctgTTTCTGAGGCACAAAAGCATTGGGACCAAAATTGtagaaaaaaggttttatttgttcaaaCAATCATATCAATCCTCAGCCGCTTCACAGACCTATTCCAGACTgacaatgaaacaaatacaaagccAACGGGGGAGACACGCACGATACAGGCAGGGAGTGACAGATAGAAAAACAGACaaccacactctctctctgtgcgcacactctgtctctctcactctatacacacactgtgcacacacacactctctcactctatacacacactgtgcacacacacacactctctcactctatacacacactgtgcacacacacacactctctcactctatacacacactgtgcacacacacacactctctcactctggTCACATTCACTTCTTCTTGTTCTCCTTGCATGCCACGACGTATCTCTGCGCCACGTTGAGGGGGGGGGAGTAGCCGTCAGCGTAGGAGGTGTCCTCGAAAAGTACCGAGTAATCATCctgaggctgagagagagagagagagagaggtggggggttaataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170274 False 668 TUCP 0.43 2 14377672 14378695
TU170275 True 708 lncRNA 0.44 2 14377672 14378695

Neighbor

gene id symbol gene type direction distance location
AMCG00012266 NA coding upstream 5076 14337873 ~ 14372596 (+)
AMCG00012273 NA coding upstream 63236 14312287 ~ 14314436 (+)
AMCG00012263 NA coding upstream 177677 14186727 ~ 14199995 (+)
AMCG00012260 NA coding upstream 259703 14100100 ~ 14117969 (+)
AMCG00012251 NA coding upstream 320118 14048952 ~ 14057554 (+)
AMCG00012276 NA coding downstream 20418 14399113 ~ 14410440 (+)
AMCG00012274 NA coding downstream 37312 14416007 ~ 14423640 (+)
AMCG00012277 NA coding downstream 49264 14427959 ~ 14434886 (+)
AMCG00012278 NA coding downstream 60013 14438708 ~ 14443094 (+)
AMCG00012275 NA coding downstream 66369 14445064 ~ 14452229 (+)
G135542 NA non-coding upstream 3727 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 9335 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 145409 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 421367 13927988 ~ 13956305 (+)
G135575 NA non-coding downstream 139521 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 156829 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 184881 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 191680 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 218435 14597130 ~ 14601583 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 21 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 81013 14246763 ~ 14296659 (+)
AMCG00012262 LOC104967735 other upstream 194505 14173913 ~ 14183167 (+)
AMCG00012253 NA other upstream 281875 14062237 ~ 14095797 (+)
AMCG00012247 NA other upstream 522617 13850378 ~ 13855055 (+)
AMCG00012267 NA other downstream 9343 14388038 ~ 14389685 (+)
G135566 NA other downstream 56270 14434965 ~ 14435728 (+)
G135573 NA other downstream 205429 14584124 ~ 14585770 (+)
AMCG00012294 NA other downstream 331549 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 585349 14964044 ~ 15245994 (+)

Expression


Co-expression Network