G135573


Basic Information

Item Value
gene id G135573
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14584124 ~ 14585770 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170313
gggaggggggagGGGTGGTCCAGGAGTCAGACTGGAGTGGGGGTCCACCCTCAGGTCGCCAACACCTCTAGGGCCCAGAGTCGTCAAAAATCACTCCACGGTCAGAGAGGGACAGACGGAGGGGAAAATAAgtatataaaaccaaaaaataaaaaaaaaagcccggATGCATTCTACATCAGAAGTAGCGGTCCAGGGTCCGAGGCAGTCTCTCCGTGGGGTGCGCCGGACACACCGCAGTCCGGGTCTTACAGTCCGTCCTCTCATCCCTCTCTCGGTTTGGGGGTTAACTCCAAAGTGTGCAGGTGCAGATTTCAGTGTCTCGAGCGAGTGTGTTGGGGGAGCATGAGTCTGTCGGTTGTATATGGAGGAGGGTGTCAGTGTCAAATGTTTAGGACCGTCTGtcgaatgtgtgtgtgtgtgtgtgtcggtctGTCCATTCGGGGTGTACAGTACATGGCCAGTGCGTCGGTACGGCACGGCATTGGTCAGCGTCAGGCTCGGTGCGTACTCTTGGTACGCGTGTCGTCATATCACTCAGGTGGGCGTCTCAGTCGGTACAGTGTTGTTCAGTCGGTGGCGTgcgcatctgtgtgtgtgtgtgtgtgtatgtgtatgtgtgctagGCCGGCCTCTCTAGTGGCTCCTGGTACCACAGTACCCGGGCTGGATCTGTGGAGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170313 True 684 TUCP 0.56 2 14584124 14585770

Neighbor

gene id symbol gene type direction distance location
AMCG00012279 NA coding upstream 13932 14567367 ~ 14570192 (+)
AMCG00012275 NA coding upstream 131895 14445064 ~ 14452229 (+)
AMCG00012278 NA coding upstream 141030 14438708 ~ 14443094 (+)
AMCG00012277 NA coding upstream 149238 14427959 ~ 14434886 (+)
AMCG00012274 NA coding upstream 160484 14416007 ~ 14423640 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 38749 14624519 ~ 14627965 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding downstream 52200 14637970 ~ 14638967 (+)
AMCG00012293 NA coding downstream 67669 14653439 ~ 14655115 (+)
AMCG00012298 NA coding downstream 328814 14914584 ~ 14915573 (+)
AMCG00012305 NA coding downstream 810582 15396352 ~ 15397381 (+)
G135594 NA non-coding upstream 7126 14563576 ~ 14576998 (+)
G135582 NA non-coding upstream 45260 14535524 ~ 14538864 (+)
G135575 NA non-coding upstream 62519 14518216 ~ 14521605 (+)
G135542 NA non-coding upstream 210179 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 215787 14368049 ~ 14368337 (+)
G135606 NA non-coding downstream 11360 14597130 ~ 14601583 (+)
G135625 NA non-coding downstream 77982 14663752 ~ 14707073 (+)
G135634 NA non-coding downstream 90082 14675852 ~ 14677500 (+)
G135656 NA non-coding downstream 218710 14804480 ~ 14804953 (+)
G135657 NA non-coding downstream 225968 14811738 ~ 14818725 (+)
G135566 NA other upstream 148396 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 194439 14388038 ~ 14389685 (+)
G135544 NA other upstream 205429 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 206473 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 287465 14246763 ~ 14296659 (+)
AMCG00012294 NA other downstream 124474 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 378274 14964044 ~ 15245994 (+)
G135649 NA other downstream 402528 14988298 ~ 15009803 (+)
G135670 NA other downstream 533955 15119725 ~ 15623881 (+)
AMCG00012309 NA other downstream 580774 15166544 ~ 15808521 (+)

Expression


Co-expression Network