G135575


Basic Information

Item Value
gene id G135575
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14518216 ~ 14521605 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170321
GTGAGTTGGGACGCGGCATGATCACCAATCACtgtagatttaattttattgttggTCATCCTCCCACCTCCAACTtctcccccatccctctctGTGAACAGAACTACTGGCagcacagaacaaaaacacacaaaacacacagcggCACGAGGCAGAGAGGAGACCCCAACTCGGTTCAACATATGAAGCTCCACCCTGCAGTCCCCCCTTGAGGCCTTGAggtgttattaaaatgttattactgCGCTATCTCTGCATTGTTCCCCAGGTATCCCTGTGGTTTGCACTTGTTATTCATGAGTtattaatgtgtaatttgtgtgtttttgctgttaCTTGTGCATCGCTACAGAATTCACATctgttgtataaataaatgcatacaaactcACAGCTCACACCTGTGCAATGACTCAGTGAAAAATACTGCACACACAGTCTCCAGCAAGGACCACAattccacaaaataaaacattcaattctctgaACCATAAAAACATCCTCCCTAGTACTGAGGCGATGTGGGGCTGCTGGCTCCACTGTCAGTGAGAGTATCACTGTATCAGCCCCCGcccaccaccccccacacacaacatCTTATACAAACTCACACCAAACAGTCGGACAAAATTAAACATCCTTGCCTTTAGTCGTATATGTCTGTATTTACAGGTATTTATAGGTTTCACCAGCACTGACAAAGAGAAACGGACACAGTGGTCGCAGGCTTCTGTACTTACAGTGGTTAATACAGAgagcacagcactgacacacacagggagagaggcgctctgacacgcacacacacacacagggagagaggcactctgacacacacacacacacacagggagagaggcgctctgacacacacacacatacaCACAGGGAGAGAGGcgctctgacacacacacacatacatacacagagagagagggctctgaaacacacacacggagagagagaggactctgacatacacacagacacacaagcacaaaCGGAGAGAGGGGCTCTGTTGACACACACGGAGGGggcattgacacacacacacatacacagagagagaggggtgggggagtgGAGAACAGACCTAAgttggacacacagacagactgaacAGCACACAAAAGGACACAGGCACTCAGtcagacacagagaggcagagagacacactcactcacacagacagacagacaatcagtcagacacacagacagaaaaccAGGTCAAGCAATATAGATATTTTACAggaatttacataattttacaGCTCCTTGCAATtttcacaaaattacaaaataataataacaataataataataataataataataatacatttatcatTTACAGACCATTGGTTTTAATGTTAGGTTCGTCATTAATTCCTTGTCTTGGGATCAGCAATTGATATGGAAGCAGACTTGCTAACGAAACACAAACTAATGATCTAACTAATTAATCAACTAACTACCCACTTTGCCCCTGCCCCTCCTCTCCAATCTCCcattctctccttctttctgtTGTCTCTCATTCCTCTCTCACTCGCTCCATCCCAACACACTGCTCCACCCTCTCCCATGCAATCTTCCCTACACTCCTCCTGACCattctccctccttctctccatccctctcccaTTTTCCCTCCagcctctctcctccctctctttcacgGGCCTTGGAACACCACTTTCTATGCCCTGATCCCTTACTCAACAATCTTATCCACTTCTCCTGCACAGTTCTCTCTGCTTGCCCATTGTCTCTGTCCAccttttcttccctctctccgcCTCTCCGTCCTTCgtttctcccctctcctcttgCACTACAGCATCCTGTTGCTGTGGAGACATGTCCTGAGTGGCGCTGGCCCCTGGCCAATCTGGAGCCAGACGGCACCTCACTGCTGTACCCACACAGCGAGAGGCCGGGGCTTAGagtgtctctctcgctctctctcttgctcgtTCTGCCGGGAGGAAGCAGGCAGGGGAGGTGGAGACTGAGTTTCCACGGCGACCAGCCCGCTCTGTGCCCGGCCCCTTGACGGCCTGCTGCCGCGATCTGATTGGACAACAGCAACTGGCTGGAGGCAAACAGGAAGAGACAGAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170321 True 2124 lncRNA 0.48 3 14518216 14521605

Neighbor

gene id symbol gene type direction distance location
AMCG00012275 NA coding upstream 65987 14445064 ~ 14452229 (+)
AMCG00012278 NA coding upstream 75122 14438708 ~ 14443094 (+)
AMCG00012277 NA coding upstream 83330 14427959 ~ 14434886 (+)
AMCG00012274 NA coding upstream 94576 14416007 ~ 14423640 (+)
AMCG00012276 NA coding upstream 107776 14399113 ~ 14410440 (+)
AMCG00012279 NA coding downstream 45762 14567367 ~ 14570192 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 102914 14624519 ~ 14627965 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding downstream 116365 14637970 ~ 14638967 (+)
AMCG00012293 NA coding downstream 131834 14653439 ~ 14655115 (+)
AMCG00012298 NA coding downstream 392979 14914584 ~ 14915573 (+)
G135542 NA non-coding upstream 144271 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 149879 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 285953 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 561911 13927988 ~ 13956305 (+)
G135356 NA non-coding upstream 569389 13946316 ~ 13948827 (+)
G135582 NA non-coding downstream 13919 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 41971 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 48770 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 75525 14597130 ~ 14601583 (+)
G135625 NA non-coding downstream 142147 14663752 ~ 14707073 (+)
G135566 NA other upstream 82488 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 128531 14388038 ~ 14389685 (+)
G135544 NA other upstream 139521 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 140565 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 221557 14246763 ~ 14296659 (+)
G135573 NA other downstream 62519 14584124 ~ 14585770 (+)
AMCG00012294 NA other downstream 188639 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 442439 14964044 ~ 15245994 (+)
G135649 NA other downstream 466693 14988298 ~ 15009803 (+)
G135670 NA other downstream 598120 15119725 ~ 15623881 (+)

Expression


Co-expression Network