G135606


Basic Information

Item Value
gene id G135606
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14597130 ~ 14601583 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170366
TTTGACCCCCAGCTCCTCCAGCGTCCTGCGCAGCACGCCGACCTTGGCCTTGACAGAGTGGCagtcctgcagcagctgcttgtAGTTCTTGCGCACGCCACAGAGGGCGATGTAGCGCTTCAGCCGCTGCACTGACTTGTGCTCCTCCTCTCGGCCCCCGGAGGACGacgtctacacacacacacggcacgGGAGAGGGGTTACGGCAcggacacacactgactgactgcacaGCAACACTACGACATGGGACCCGTTATAACAGCAATGGTACAATGAGCACACTCACTTTCTTCCCCATCTTCCCTTCTTTCTCGGCGCTGCCCTTCTTTTTCGTACCCCCTCGCTGCGGGCCTGCCTTGCTCTCCTCCTCGTCCAGAGAAGGCAGGGAGGAGGAGTCGGAGTCTGATCccttctgtttcttcttctcGTCCTCTTCCACACTTTCCTCCAACTCTGccgggtgagagagagagagagagagagagagagagaaagcagaatGACCagtcagacacagagacaggctCTTATgatgtccagtcagtcagtgtgtctgtactaaCCCCTGTATTAACCCCTGGAAGACACACTCTTTCACTCACCATCTCCATCGCTCTCCTCCTCTTTTCTCCCTCCtttcttcttctctccctctttcattCCATTCTGCCCTCCCTCTTCATCGCTCCCCGAGTCCCTCTGTTCTTCATCTtcttcgctctctctctcgtgcgGTTTCGTTCCCATCTTCCTggctctcctccctccccccttTCCCTTGCTCTCGGTCTCTACATTTCCCTTCGTTGTCTTTTCCATCTGTTTCTCATCACTCTCTTCCTCGCTTTCTGACCCACTCTCTACCGCTACTGCCTTCTGTTTTACTCCCTTTGCCTTCCCTCTGCTATCCTGCTCTTCCTCGCTCTCAGACTCACTCTCTACCTCTATTGCCTTGTGTTTCGCTCCCTTCTTCATCTGAACTCTCTTCCCCTTCTCTTCCTCGCTCTCAGACTCACTCTCTACCTCTATTGCCTTCTGTTTCGCTCCCTTCTTCATCTGTCCTCTCTTCCCCTTCTCTTCCTCGCTCTCNNGCTCACTCTCTACCTCTATTGCCTTGTTTTTTGCTCCCTTCTTCATCTGTCCTCTCTTCCCCTTCTCTTCCTCGCTCTCCGGCTCACTCTCTACCTCTATTGCCTTGTTTTTTGCTCCCTTCTTCATCTGTCCTCTCTTCCCCTTCTCTTCCTCGCTCTCCGGCTCACTCTCTACCTCTATTGGCTTCTGTTGCTTCCCCCTCCCTGCACGCTCAATGCCAGAGTCCGGGGAATCTGGATCAGAGGGAGCCCGTCGAGACTTCTTCCTgcactcctcctctccctcgctctccccTCTCTTGCGCTTGGGGGCGCGGGCGGAGGACGAGACCAGTTTAATGAGCGGCTCGTCGTCATCGCTGCTGTCGCTGCCCtgaaagcgagagagaggcGCAGGGGttgacacagcacagacaccGACTGCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170366 True 1522 lncRNA 0.55 4 14597130 14601583

Neighbor

gene id symbol gene type direction distance location
AMCG00012279 NA coding upstream 26938 14567367 ~ 14570192 (+)
AMCG00012275 NA coding upstream 144901 14445064 ~ 14452229 (+)
AMCG00012278 NA coding upstream 154036 14438708 ~ 14443094 (+)
AMCG00012277 NA coding upstream 162244 14427959 ~ 14434886 (+)
AMCG00012274 NA coding upstream 173490 14416007 ~ 14423640 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 22936 14624519 ~ 14627965 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding downstream 36387 14637970 ~ 14638967 (+)
AMCG00012293 NA coding downstream 51856 14653439 ~ 14655115 (+)
AMCG00012298 NA coding downstream 313001 14914584 ~ 14915573 (+)
AMCG00012305 NA coding downstream 794769 15396352 ~ 15397381 (+)
G135594 NA non-coding upstream 20132 14563576 ~ 14576998 (+)
G135582 NA non-coding upstream 58266 14535524 ~ 14538864 (+)
G135575 NA non-coding upstream 75525 14518216 ~ 14521605 (+)
G135542 NA non-coding upstream 223185 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 228793 14368049 ~ 14368337 (+)
G135625 NA non-coding downstream 62169 14663752 ~ 14707073 (+)
G135634 NA non-coding downstream 74269 14675852 ~ 14677500 (+)
G135656 NA non-coding downstream 202897 14804480 ~ 14804953 (+)
G135657 NA non-coding downstream 210155 14811738 ~ 14818725 (+)
G135721 NA non-coding downstream 750302 15351885 ~ 15357725 (+)
G135573 NA other upstream 11360 14584124 ~ 14585770 (+)
G135566 NA other upstream 161402 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 207445 14388038 ~ 14389685 (+)
G135544 NA other upstream 218435 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 219479 14375633 ~ 14377651 (+)
AMCG00012294 NA other downstream 108661 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 362461 14964044 ~ 15245994 (+)
G135649 NA other downstream 386715 14988298 ~ 15009803 (+)
G135670 NA other downstream 518142 15119725 ~ 15623881 (+)
AMCG00012309 NA other downstream 564961 15166544 ~ 15808521 (+)

Expression


Co-expression Network