G135625


Basic Information

Item Value
gene id G135625
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14663752 ~ 14707073 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170391
aagagagagagagagagagagagagagagagagagggaggaagggggggagagagagagggaggaagggagaaagagagaacgAGAGATGCAAAGGAGGAAGAGTTTACAGTTTTAAGGCTTTTTAGTGCATAACAGTGAGAGGCAGCTCCGCAGATCCTCAGGGGACACTGTACAAACGGCGCCCATCTCTCTCCACAACTTCTCCTCCTcgctcctctccccctctctctctccctcctgctctcCGGGACCGGCCctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170391 True 269 lncRNA 0.55 3 14663752 14707073

Neighbor

gene id symbol gene type direction distance location
AMCG00012293 NA coding upstream 8637 14653439 ~ 14655115 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding upstream 24785 14637970 ~ 14638967 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding upstream 35787 14624519 ~ 14627965 (+)
AMCG00012279 NA coding upstream 93560 14567367 ~ 14570192 (+)
AMCG00012275 NA coding upstream 211523 14445064 ~ 14452229 (+)
AMCG00012298 NA coding downstream 207511 14914584 ~ 14915573 (+)
AMCG00012305 NA coding downstream 689279 15396352 ~ 15397381 (+)
AMCG00012303 NA coding downstream 692360 15399433 ~ 15400438 (+)
AMCG00012306 NA coding downstream 723215 15430288 ~ 15430887 (+)
AMCG00012307 NA coding downstream 816439 15523512 ~ 15530379 (+)
G135595 NA non-coding upstream 53015 14570375 ~ 14610737 (+)
G135606 NA non-coding upstream 62169 14597130 ~ 14601583 (+)
G135594 NA non-coding upstream 86754 14563576 ~ 14576998 (+)
G135582 NA non-coding upstream 124888 14535524 ~ 14538864 (+)
G135575 NA non-coding upstream 142147 14518216 ~ 14521605 (+)
G135656 NA non-coding downstream 97407 14804480 ~ 14804953 (+)
G135657 NA non-coding downstream 104665 14811738 ~ 14818725 (+)
G135721 NA non-coding downstream 644812 15351885 ~ 15357725 (+)
G135666 NA non-coding downstream 1095356 15802429 ~ 15806653 (+)
G135768 NA non-coding downstream 1104840 15811913 ~ 15812121 (+)
G135573 NA other upstream 77982 14584124 ~ 14585770 (+)
G135566 NA other upstream 228024 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 274067 14388038 ~ 14389685 (+)
G135544 NA other upstream 285057 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 286101 14375633 ~ 14377651 (+)
AMCG00012294 NA other downstream 3171 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 256971 14964044 ~ 15245994 (+)
G135649 NA other downstream 281225 14988298 ~ 15009803 (+)
G135670 NA other downstream 412652 15119725 ~ 15623881 (+)
AMCG00012309 NA other downstream 459471 15166544 ~ 15808521 (+)

Expression


Co-expression Network