G135670


Basic Information

Item Value
gene id G135670
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15119725 ~ 15623881 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170455
GTCCAGAGTCCACAGTGGTCAGTATTGGTGCTGACAGCTCCAAGACCCTGTAAATGTGATCTGATCTGGGTGTCTGATTCTGTTTCATCATCAAGAAGCCGACGCATCACAAGCCTTCATCAAAGCAACTTCGTCTGACCGCAGTATAACAGATATGAAGAAAGACAACCTGTGTGAGAATTTGGACCATAAACCTGCCAATCCTTCATCAACGATGAAACAACCTGAACCAGGGACATCCCTGCCAAGAAGCACTGAAGGACCTCAGAAGAGCAGTGATGGGAGAGTGTCTCTGTACAAGAGGATCTCACTGCTCCTTGCCTGTGTGTGGATCCTCAGTCTCATCTCTGGACTGGCTGTGTACTttttccttgGTTCAGTAGACAAGCAGAGTGAGATGTTGAAGCTGCAGGAGAACAACACCGCTCGGATAACTGagctgcagagagaaaaggagaCCCTTCAGACAGAGCATTCAGTCTTACTGAGATCCAACACTGAACTGAAAAAGCAACTGCAGAACAAGGAGAATGAAAACTCAAATCTACAGAGCAAATACAGCAATGTGAAGGCTGGCTGTGATGTGTGGAAGTGGCTTCGTTATGTAGCagTGGATGTGACTCTGGACCCCAATACAGTGAATCCCTTTCTCATCCTGTCCGAGGATGGGAAACAAGTGAGACATGGAGATGAACGACAGGTTCTCCGCAACAATCCAAAGAGATTTGATTATGTTATCTGTGTCCTGGGAAAGGAGAGTTTCAGTTCAGGGAGACACTACTGGGAAGTGGAGGTGGGGGAGAAGACTGCGTGGACTTTAGGAGTTGCCAGAGAGTCCATCAACAGGAAGGGGAAGATTACAGTGAGCCCTGGGCTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170455 True 880 TUCP 0.48 9 15119725 15623881

Neighbor

gene id symbol gene type direction distance location
AMCG00012298 NA coding upstream 204152 14914584 ~ 14915573 (+)
AMCG00012293 NA coding upstream 464610 14653439 ~ 14655115 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding upstream 480758 14637970 ~ 14638967 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding upstream 491760 14624519 ~ 14627965 (+)
AMCG00012279 NA coding upstream 549533 14567367 ~ 14570192 (+)
AMCG00012310 NA coding downstream 140148 15764029 ~ 15815714 (+)
AMCG00012313 NA coding downstream 264817 15888698 ~ 15896509 (+)
AMCG00012316 NA coding downstream 317751 15941632 ~ 15984389 (+)
AMCG00012317 NA coding downstream 363178 15987059 ~ 16057103 (+)
AMCG00012321 NA coding downstream 433972 16057853 ~ 16100861 (+)
G135657 NA non-coding upstream 301000 14811738 ~ 14818725 (+)
G135656 NA non-coding upstream 314772 14804480 ~ 14804953 (+)
G135625 NA non-coding upstream 412652 14663752 ~ 14707073 (+)
G135634 NA non-coding upstream 442225 14675852 ~ 14677500 (+)
G135606 NA non-coding upstream 518142 14597130 ~ 14601583 (+)
G135666 NA non-coding downstream 178548 15802429 ~ 15806653 (+)
G135768 NA non-coding downstream 188032 15811913 ~ 15812121 (+)
G135779 NA non-coding downstream 255253 15879134 ~ 15900621 (+)
G136025 NA non-coding downstream 479013 16102894 ~ 16103304 (+)
G136040 NA non-coding downstream 547858 16171739 ~ 16172095 (+)
G135649 NA other upstream 109922 14988298 ~ 15009803 (+)
AMCG00012294 NA other upstream 392942 14710244 ~ 14726783 (+)
G135573 NA other upstream 533955 14584124 ~ 14585770 (+)
G135566 NA other upstream 683997 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 730040 14388038 ~ 14389685 (+)
AMCG00012308 NA other downstream 60597 15684478 ~ 15689338 (+)
G135781 NA other downstream 287367 15911248 ~ 15930848 (+)
AMCG00012324 NA other downstream 481024 16104905 ~ 16142641 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other downstream 552515 16176396 ~ 16183090 (+)
G136076 NA other downstream 626367 16250248 ~ 16259332 (+)

Expression


Co-expression Network