G135988


Basic Information

Item Value
gene id G135988
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15921604 ~ 15925153 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170896
GCCTCTTTAAAGGTtcctaataaaataaagcactcgACACTGAGTTTTTCCAAAGCAAAAACTGTGATTTATTAATCTGTCTCCGAGGTACTTCTCTTCCccctttttccttcagattctcTATAACCACACCGATGTTTCTCTTCATTAAACTCCCGCTCAACTCGACCCCTAACCCGTCACCAGGCCCTTATATATTCCCCTATCTGGCGACggggggagccacacagacacacttacccACAAAtatccctccctaacccaacaCAATAATGCCCCACacataacacacattcacactcatgcacaaacacaaataggCAGACAGAGTCCCAGAACTGACTCAcccaccctgcatacacacttttacaccccccaccacctttgggctgccctaatggcacattcacacagacacccgccaggatcgctacagtatgaaggcgaacacgattcaattaacgtgtgtccatttacaagttaaattaatgaataaataaattcagcagatctgggtttccctctaaaacataaggactggtttaataaatgcgtccataaacgtcatgactgagacgcgcactttagttcaattaaagctgctctattgtagctggatgaatAATAGTGAAACGTGTATTTCGTTTCAaatgtaacttgccctggttaaggacgtctgataagtaaattataaataatgcagcaaaaagtattgtttgcagttacaaatctgtaataaattaagggagtcaagctgtgccgtttaaaatacatatatactagcacaaatgatgacgataataataacaatacatatttgatatttagtattattgttgcacatggaaacgtattcttatggggacatgcttgtctgaatataatgttgtctctacacgtttagctcttcctaacatctcttaacagaaacgtgtatttattacgccgtttacaatcatgtaaagcacaaagaataaaacagacacaaaagtcctctctcgtcaggctgtgtcgctcatagtgttgttctcagtctctgtttttaacgcaaacacaaaccaaacccacagtcgctgctcctcccataagagggacagacttcacagcggcctggttttgaaacaaatgctctgggactccggcacggcatggcacgacacgGCGCTTAAGCcggtggaaccgaggcatttgTGAaaaaaataataaacttaagCATTTAACTTATTTGCAATTGTTTGTCAGGCTTCTTCCCTGGCTTTTACTGCTGTGGCTTCATTggctttattcaatataatgtcCTTTTCTTCCTCATAGCCTTCCATAATTAGTGCTGTTCAGTAGCACTGAAACAGACAGCGCGCTCCTCTGCCAACgctaaatcattttttttatgcgCCACTGAACATCGTTTTGTAGCCAAACAGGAATGCGCACTTATCCTCAATTAGAGAAATCTGTCTTAGGTTAACAAGCTAATTAAATCCGAGAAGAACCAAAAATCCTGGATATCAGTTAGTTGTTTAGCTCAAGTCAACTTAGCCTGATAGGTCCCTGGTGTCTAGATTCTATTTGTGTTGGCTTATATTTCTGGGCTCCCCTTCTACTTGTTTATCTTTATTAAGCACTCTCTTTCTCATGTGAACCTGCTGGTGACGTTTTAGGTTGTTTGCCCGAGTGAATTctttcccacactgggagcagcagtaCAGTTTATATCCTGTGTGAACCCACTGGTGAGTCTTAAGGCTATCTAAACGTCcaaagctcttcccacactgggagcagcaaCATGGTCCCTCTCCTGTGTGAATCTGCTGGGGGGATTGAAGGCTTTTTGCATATCCAAAGCTCTCCCCACTTTGAGAGCAACTGTCTGGTTTATTTCCTGTGTGAATGAACTGATGAGATTCAAGGGGTGCTAGCCTAGTGAAGCCCTTTCCACACTGGGAACAGGGACATGGTTTCCCTCCTGTGTGACTGAGCTGGTGAATTCTAAGGTGTGCTGGCTGAtggaaactcttcccacactgggagcagcagtaTGTTTTTTTACGCGTGTGAATTTTCTGATGAGCTTGAAGGTATCTTGCTTGAGagaagcccttcccacactgggagcaggagTATGTTTGGTCACGTTTGTGAACTGCCTGATGAGTATGAAGGTATCTTGCTTGAGAGAAGCGCTTTCCACAATGGGAGCAGCAATATGGTTTCTCtaaagtgttgtgttgtgtgttgtcttGATGTTTTTTCAAGCTTGACAATTTACTATATCTCTTGCCACACTGGGGGCAGCTATGGCAGCCCTGATGTTTCTGAGCTCGTTCTGAGGGGGGAGTGTGGGAGGTGGAGGGTCTCGGACACAGCTGTCTGTACTGTGATGATGAGCTCTGAACCGTCTCTGTACTATCACTCCCTCCACTGAGCTCCTTCCTCAGGGCAGCAGACTGAGGGTCACACTGTCCATCTACACAGGGCTCAGACTCTAGTTCAGATAGCTCAGGTTCTAGTTTAGACAGTCCATCTACAGGGAGCACAAGTTCCGGATTACACACAGTTTCTATAATATTCTCAGGTTTTATATTTCCAAGTGTGTATGTGAAAGGTGTCTGCATACTTGGCTCCATTTTGTAGACCTCAGACTCCAGTGTATCATcctctgttttaatgtaatgagaCACCAGAAGAGGTTCAcactgttctctgctctgtccACACTCTGATCCCAGAGCCCCAAGTCCCTGTGTAAAACCCTCAGCTTGTGGCTCCGTACTGTGGTCAAACTCCAGTCCCTCGACCTTGAGCTCCTTTTCACTCTGTCTGCTCTTGTGCTGCTCAGTCAGCCCCTGGTTGTCTTCAGTAtctgtgggctctgtgtcctgcctcagactggagctCCACTCCTGctcacagtgctgctgctcaatgggagccctttccccagagtcagggagagcgctggcctctacagctcctgggggagaaTCAAGACAGGAGAAcagcactgagaacagcagctctgaggACAGGCCACTAGTACAGGTCAGAATAGCATCCAAGcacttttgtaaaatatatccataccaaaacattataaactataacattttcaaagtagTTAGTTAGTTTGGGAATaaagtatttctttatttagattaatgctgctgctgctgccacctTGTCTACAGTGGATTGCATGAACATTCACCCCACAAGGACTTTCTgtagtgttacaatctggaactaaaatgtatttcatttggaATTCCTGTCTACACAAAGTATTGCATGTATATGTTgtaattgtatgtttatttattaactacaaataaaatacagaaatgtactgATTGCATATGTATTTACCCCCCATTGTATGACTCCTAAATCAGCTTTGGCGCAAACAATTGCCTTCAGGAGTCACATAACTAGTTGAATacagtccatctgtgtgcaattaaagtgtcacgtgatttcagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170896 True 3484 TUCP 0.44 2 15921604 15925153

Neighbor

gene id symbol gene type direction distance location
AMCG00012314 NA coding downstream 14522 15895089 ~ 15907082 (-)
AMCG00012315 NA coding downstream 35981 15884110 ~ 15885623 (-)
AMCG00012311 NA coding downstream 46874 15864062 ~ 15874730 (-)
AMCG00012312 NA coding downstream 118085 15764019 ~ 15803519 (-)
AMCG00012304 NA coding downstream 542741 15374349 ~ 15378863 (-)
AMCG00012323 NA coding upstream 68610 15993763 ~ 16005231 (-)
AMCG00012322 NA coding upstream 124301 16049454 ~ 16054218 (-)
AMCG00012328 NA coding upstream 259246 16184399 ~ 16187510 (-)
AMCG00012329 NA coding upstream 330122 16255275 ~ 16255478 (-)
AMCG00012334 NA coding upstream 393482 16318635 ~ 16322600 (-)
G135975 NA non-coding downstream 105433 15813120 ~ 15816171 (-)
G135973 NA non-coding downstream 109851 15810796 ~ 15811753 (-)
G135913 NA non-coding downstream 413952 15504417 ~ 15507652 (-)
G135864 NA non-coding downstream 1101668 14818855 ~ 14819936 (-)
G135859 NA non-coding downstream 1164575 14756522 ~ 14757029 (-)
G136024 NA non-coding upstream 175656 16100809 ~ 16101090 (-)
G136029 NA non-coding upstream 202543 16127696 ~ 16161198 (-)
G136041 NA non-coding upstream 246606 16171759 ~ 16172088 (-)
G136066 LOC102198857,LOC106578327 non-coding upstream 290248 16215401 ~ 16217071 (-)
G136112 NA non-coding upstream 357296 16282449 ~ 16291458 (-)
G135957 NA other downstream 189470 15706934 ~ 15732134 (-)
G135857 NA other downstream 1127446 14725510 ~ 14794158 (-)
G135856 NA other downstream 1200434 14717472 ~ 14721170 (-)
AMCG00012291 NA other downstream 1271277 14608810 ~ 14650327 (-)
AMCG00012292 NA other downstream 1318763 14596158 ~ 14602841 (-)
G136070 NA other upstream 294973 16220126 ~ 16227243 (-)
G136125 NA other upstream 387568 16312721 ~ 16314393 (-)
AMCG00012340 NA other upstream 489954 16415107 ~ 16432813 (-)
G136222 NA other upstream 773489 16698642 ~ 16699110 (-)
G136223 LOC105892008 other upstream 774322 16699475 ~ 16699791 (-)

Expression


Co-expression Network