G136025


Basic Information

Item Value
gene id G136025
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16102894 ~ 16103304 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170939
TGCATAGCCTTCACATCAGTTTTATCAGTTACAATACGTATGTGCTAAATAAGTGTAGCATACTGTatgtggtggggtagcattatatgtgaaaaatgacattgaggcagaagaacttgtattagatcccagtaacggaacagaatctttgtgggtgaaactgttgaacaagagatctggaggattagcggtaggagtgtgttacaggccaccaaactcagatattcagaaagatgctgcattgtacagtgtaatcaggactgcatgtagcaaggatgtggctgttataatgggggatttcaatttcccaaacttagactgggaaagcccagtggggactacagaagcagaaatagaaatggttgagatggtaaatgactgctttctaactcaatttgtcagggaaccaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170939 True 411 lncRNA 0.41 1 16102894 16103304

Neighbor

gene id symbol gene type direction distance location
AMCG00012321 NA coding upstream 2033 16057853 ~ 16100861 (+)
AMCG00012317 NA coding upstream 45791 15987059 ~ 16057103 (+)
AMCG00012316 NA coding upstream 118505 15941632 ~ 15984389 (+)
AMCG00012313 NA coding upstream 206385 15888698 ~ 15896509 (+)
AMCG00012310 NA coding upstream 287180 15764029 ~ 15815714 (+)
AMCG00012320 LOC108256206,LOC107686994,LOC108411041,LOC107690275,LOC107729189 coding downstream 39346 16142650 ~ 16155119 (+)
AMCG00012319 NA coding downstream 60964 16164268 ~ 16169716 (+)
AMCG00012325 NA coding downstream 95699 16199003 ~ 16210644 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding downstream 109609 16212913 ~ 16226772 (+)
AMCG00012326 NA coding downstream 184573 16287877 ~ 16288823 (+)
G135779 NA non-coding upstream 202273 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 290773 15811913 ~ 15812121 (+)
G135666 NA non-coding upstream 296241 15802429 ~ 15806653 (+)
G135721 NA non-coding upstream 745169 15351885 ~ 15357725 (+)
G135657 NA non-coding upstream 1284169 14811738 ~ 14818725 (+)
G136040 NA non-coding downstream 68435 16171739 ~ 16172095 (+)
G136051 NA non-coding downstream 90671 16193975 ~ 16196114 (+)
G136177 NA non-coding downstream 434758 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 462595 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 516951 16620255 ~ 16632264 (+)
G135781 NA other upstream 172046 15911248 ~ 15930848 (+)
AMCG00012309 NA other upstream 294373 15166544 ~ 15808521 (+)
AMCG00012308 NA other upstream 413556 15684478 ~ 15689338 (+)
G135670 NA other upstream 479013 15119725 ~ 15623881 (+)
G135744 NA other upstream 539058 15559904 ~ 15563836 (+)
AMCG00012324 NA other downstream 1601 16104905 ~ 16142641 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other downstream 73092 16176396 ~ 16183090 (+)
G136076 NA other downstream 146944 16250248 ~ 16259332 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 290395 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 457345 16560649 ~ 16648562 (+)

Expression


Co-expression Network