G136040


Basic Information

Item Value
gene id G136040
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16171739 ~ 16172095 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170957
ctcaaattggaaactgcaggcattcagggtaatgtaagtagatggattatgaactggttgatgtctaggaaacagagggtgtcgattagaggagtcgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctatattaatgatctggactctgggatagttaacaaacttgtcaaatttgcagatgatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcagagggacttagataatattcagttgtgggccgacacctggcaaatgaaattcaatgtggacaagtgcaagataatacatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170957 True 357 lncRNA 0.41 1 16171739 16172095

Neighbor

gene id symbol gene type direction distance location
AMCG00012319 NA coding upstream 2023 16164268 ~ 16169716 (+)
AMCG00012320 LOC108256206,LOC107686994,LOC108411041,LOC107690275,LOC107729189 coding upstream 16620 16142650 ~ 16155119 (+)
AMCG00012321 NA coding upstream 70878 16057853 ~ 16100861 (+)
AMCG00012317 NA coding upstream 114636 15987059 ~ 16057103 (+)
AMCG00012316 NA coding upstream 187350 15941632 ~ 15984389 (+)
AMCG00012325 NA coding downstream 26908 16199003 ~ 16210644 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding downstream 40818 16212913 ~ 16226772 (+)
AMCG00012326 NA coding downstream 115782 16287877 ~ 16288823 (+)
AMCG00012330 NA coding downstream 120176 16292271 ~ 16300821 (+)
AMCG00012332 NA coding downstream 135314 16307409 ~ 16316260 (+)
G136025 NA non-coding upstream 68435 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 271118 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 359618 15811913 ~ 15812121 (+)
G135666 NA non-coding upstream 365086 15802429 ~ 15806653 (+)
G135721 NA non-coding upstream 814014 15351885 ~ 15357725 (+)
G136051 NA non-coding downstream 21880 16193975 ~ 16196114 (+)
G136177 NA non-coding downstream 365967 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 393804 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 448160 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 656955 16829050 ~ 16831802 (+)
AMCG00012324 NA other upstream 29098 16104905 ~ 16142641 (+)
G135781 NA other upstream 240891 15911248 ~ 15930848 (+)
AMCG00012309 NA other upstream 363218 15166544 ~ 15808521 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other downstream 4301 16176396 ~ 16183090 (+)
G136076 NA other downstream 78153 16250248 ~ 16259332 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 221604 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 388554 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 502184 16674279 ~ 16706193 (+)

Expression


Co-expression Network