G136195


Basic Information

Item Value
gene id G136195
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16620255 ~ 16632264 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171156
ACTGGGTGTGGCACATGGACACCTGCTGTACCAGCAATTCATAAGTAACATCCCTCTCCTGATCAGAATACACAACTGCCATTATCTCTCCagatggtgtttttaaacatgttagTTTTACTCCTGGGACTGGGTGTGGCACATGGATGCTGTCCAGGAGGTATGTAGATTCACTTACCTAACCATAATTTCTTCCATCTGACAACTGATGTAGTTTCCTTTCCCAAATGGTAAAAGTACAATTATCCCACTGACTTTACTATTATTGAAC

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU171156 True 271 lncRNA 0.41 3 16620255 16632264

Neighbor

gene id symbol gene type direction distance location
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 83010 16530753 ~ 16537245 (+)
AMCG00012342 NA coding upstream 102634 16513859 ~ 16517621 (+)
AMCG00012336 NA coding upstream 218058 16400490 ~ 16402197 (+)
AMCG00012337 NA coding upstream 241268 16367429 ~ 16378987 (+)
AMCG00012341 NA coding upstream 255359 16364511 ~ 16364896 (+)
AMCG00012347 NA coding downstream 18069 16650333 ~ 16670699 (+)
AMCG00012350 NA coding downstream 81082 16713346 ~ 16715975 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding downstream 180521 16812785 ~ 16818439 (+)
AMCG00012360 NA coding downstream 245113 16877377 ~ 16900435 (+)
AMCG00012366 NA coding downstream 345308 16977572 ~ 16984994 (+)
G136191 NA non-coding upstream 54024 16565899 ~ 16566231 (+)
G136177 NA non-coding upstream 81106 16538062 ~ 16539149 (+)
G136051 NA non-coding upstream 424141 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 448160 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 516951 16102894 ~ 16103304 (+)
G136236 NA non-coding downstream 196786 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 210303 16842567 ~ 16907105 (+)
G136286 NA non-coding downstream 279971 16912235 ~ 16914695 (+)
G136297 NA non-coding downstream 324425 16956689 ~ 16957295 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding downstream 325194 16957458 ~ 16978213 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other upstream 187442 16393699 ~ 16432813 (+)
G136076 NA other upstream 360923 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 437165 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 477614 16104905 ~ 16142641 (+)
G135781 NA other upstream 689407 15911248 ~ 15930848 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 42015 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 101162 16733426 ~ 16765108 (+)
G136245 NA other downstream 179442 16811706 ~ 16863593 (+)
G136255 NA other downstream 234273 16866537 ~ 16867448 (+)
G136258 NA other downstream 239574 16871838 ~ 16875600 (+)

Expression


Co-expression Network