Gene
RNA
| Item | Value |
|---|---|
| gene id | G136203 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 16642363 ~ 16642613 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04064 | NF-kappa B signaling pathway |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU171164 | True | 226 | lncRNA | 0.50 | 2 | 16642363 | 16642613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012344 | NA | coding | downstream | 131754 | 16495789 ~ 16510609 (-) |
| AMCG00012346 | NA | coding | downstream | 147682 | 16481950 ~ 16494681 (-) |
| AMCG00012345 | NA | coding | downstream | 166161 | 16446399 ~ 16476202 (-) |
| AMCG00012339 | ppp4c,ppp4cb,LOC105024361 | coding | downstream | 202292 | 16436796 ~ 16440071 (-) |
| AMCG00012335 | NA | coding | downstream | 280494 | 16355510 ~ 16361869 (-) |
| AMCG00012352 | NA | coding | upstream | 76149 | 16718762 ~ 16722047 (-) |
| AMCG00012353 | NA | coding | upstream | 122461 | 16765074 ~ 16773064 (-) |
| AMCG00012359 | NA | coding | upstream | 144391 | 16787004 ~ 16790899 (-) |
| AMCG00012357 | LOC107726679,LOC107671462,LOC107592127 | coding | upstream | 186421 | 16829034 ~ 16841186 (-) |
| AMCG00012358 | NA | coding | upstream | 199954 | 16842567 ~ 16852573 (-) |
| G136186 | NA | non-coding | downstream | 90082 | 16552030 ~ 16552281 (-) |
| G136175 | aldoa,LOC108249121,LOC103373891,LOC107713203,LOC107581922,LOC107661747 | non-coding | downstream | 105092 | 16526517 ~ 16537271 (-) |
| G136172 | NA | non-coding | downstream | 119915 | 16519886 ~ 16522448 (-) |
| G136112 | NA | non-coding | downstream | 350905 | 16282449 ~ 16291458 (-) |
| G136066 | LOC102198857,LOC106578327 | non-coding | downstream | 425292 | 16215401 ~ 16217071 (-) |
| G136224 | NA | non-coding | upstream | 57376 | 16699989 ~ 16700204 (-) |
| G136225 | NA | non-coding | upstream | 61975 | 16704588 ~ 16704813 (-) |
| G136226 | NA | non-coding | upstream | 66961 | 16709574 ~ 16711633 (-) |
| G136307 | NA | non-coding | upstream | 313529 | 16956142 ~ 16956359 (-) |
| G136372 | NA | non-coding | upstream | 396724 | 17039337 ~ 17039966 (-) |
| AMCG00012340 | NA | other | downstream | 209550 | 16415107 ~ 16432813 (-) |
| G136125 | NA | other | downstream | 327970 | 16312721 ~ 16314393 (-) |
| G136070 | NA | other | downstream | 415120 | 16220126 ~ 16227243 (-) |
| G135988 | NA | other | downstream | 717210 | 15921604 ~ 15925153 (-) |
| G135957 | NA | other | downstream | 910229 | 15706934 ~ 15732134 (-) |
| G136222 | NA | other | upstream | 56029 | 16698642 ~ 16699110 (-) |
| G136223 | LOC105892008 | other | upstream | 56862 | 16699475 ~ 16699791 (-) |
| AMCG00012365 | NA | other | upstream | 268879 | 16911492 ~ 16914685 (-) |
| AMCG00012372 | tpm3,LOC106570192 | other | upstream | 421943 | 17064556 ~ 17098725 (-) |
| G136378 | NA | other | upstream | 450886 | 17093499 ~ 17133907 (-) |
