G136295 (LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599)


Basic Information

Item Value
gene id G136295
gene name LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16957458 ~ 16978213 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171278
TGCACGATGAGGTGGTACAACAAGGTttactgaacaaaaaaataagcattttctgGAAGGAAATAAACCAATCATTCCTCTGTATCTCCTATTGAGTGATTAAGTGCTTCCATTTGTATTCCAAAGTGCATTCtaataagaagaaaatgtacaacaacacacagaaacatcacTGACCAAgatcacagagagagacagtgaagagcacacaatgaagacaaataaaaacacatgcatagTACAATTCAGTTTTAAGTAGTGTCCCGGGAGTCAAAATGGACATGTaatatgacacattttaaagggCAAATTCTGCATTCACAACATATAGACAGGAGGCACTCTTGGCATGGTAGGGTCTAGTTTTTGTGTCTTAGGTCGACTATAATAAAAGGCCTTCCCAGTGCAAAGGCTGCTCAGATCTAACGCCAGGATGGATCTCTCACGttggaaagaaattaaataatctcACTCTACAAGGCCTCAAACTTAAGTTAAAGTGAAAGAGTATGTGTGAAAGCtgttttgaaaaacagacaaacaataaaaaaactttcTTTGGCCAACTTGCTCTTTCAAAATCAATAGGTAAGGGCAAGCTGTGAACTGGAACGACTACCGTGTTCAATTCTGCAGGCATGTCGGGCCGCAGGTTTCAGACTGGCCCCAATGTCGTGTTTTAACCGGCGACAGCACTAGTGTAAACAAATCAGTGTTACCAAGGAACAAGGATGCAAATAATCAAAGGTTATGTATACAGCGAGCATCCCTTCCCTGGAAATCTACCCTTTGCGGTTCAGCCgtgaaggtttttctttttctttctacttCAGAGCCCTTGTACAGACTCCATAGTGAGGCACAGACTACACTGGACATTGTGAACTGATAGGATTTAATATTTATCTAGTGGTTACGATGTAATGAGGTTAAAGGATAAGACTGTCCTGTTTTTTgggtttatttcaaaatatctatTTCCTCATTATAACATCTTAAGACAGTCACGTTTCTCAAACTCATGCTGCATTAACAGGAGACAGCAAACAATGACTGCACTAGCGAGATTTCAAAAAAGAACCAAGACATGAAagtgcagatttaaaaaaaaaatacctctATCGTGCCGGGGTGATTATATTTCAACAGCTCTTATAAATCGGATGGATTTTCAGCAATACGACGTAGatagtttattttaagtgtaGTGTAAGAGTATATAAGATTATAATACATTCAGTTTCCTATGCAAAACATATTGGTGTGACTTAGTCAAAGCATAACAGAAGTTAAAGAACAAGAGATTTCAACAGAACTGCAGTTTGTAGTGAATATCTAGAACTGGGAATCAGACTCAATTCAACATCGGAACCATCAGGACAGTTTAAAAAGGTCTACTAAATGACTACAGCTTTTTTCCTCTGAAGAAGATTGCATCGGTATTCCAGGATGCAATCTCTTTCAGTTTCCAGTCCAGTCTGGTTTCGATATTACGCTTCACTTGCGCAATATcgtaatttttttattgattttgagAATGTAGTGTACATCTAGTGGGGcctttgttattattctgtcatTAAGAGCCACATAACGAAGGAGAGGTTTTTGtagtgttttagttttaaacttCCCTAGCCACACAAAAGATATACGTCAACAAGAAGCCAGTGCAAATCAGGTCAATAAAGAGATCTACACATGGAactgcatattcatatttttcagagCTTTGTAACGGTTTcctttttgctgttttgttgcCCAACAGAAGAGGCGTCACACAGTTTTGCACAAAGTGATGGCTGCTTTGTTCAAATTAGTGTTACAGAGATATACTGTCACACAGCCTCACACTCAGATGACACAACGGGGTTAGTGTTTGTAGGGATGAATAGCTTACAATGAACAAACACGCCAGAGCTCCGAAGAGCATCCGTTTCAGTTTCTGTgtgcagaggaagaggaggcaaGCACTTTCCCCCAGCAGTGTGAAGAAACGTGTTCAAAACGGCTGGCGAGTTTCCTAAAGCAGACGGATTCGTAGTGCTGTTTGGTAATAAACTACCAGCATCAGGCTATATTCAACAGATCAGAAACATGAGACTCGGAGATTTGGTTACATACTGAGAGAAGGCAGAGACTGGCTGCTTTGGAGGAGTAATTCAGATCATTGGCCGTTTCCTGTCATTATCGTTCGCTCTGGATGGCATGTTTTAATTGGAGTGTCCGCTCAGCCAGGTTTTCTCAGTGTTTACTGGCAGGAAGTCGACAAGGGAATTAATCTGTGGCGCACAGTGCTTTTTGGCTCGTTCGTAAAGCACTGAGGTCCAACTTGGGACAAATGGTCTGGAGAAAAGAGGCATATTTCAATGTCTGAAGGCTAGTATGAGACCTGTTCTTTTAATAGATGTGTTGAGTGCAAATCCCAACTGGAAGGAGCCCTAGTGTTCAGATTGTGGAGTATTAGGAATCCGTGACCTCTGTTGATCACGTGAAACTATAGACTACCTGGAAGTCTGGCGAAATTGAACTGGTTTCggttcaaaatgtataatgcatcCTAATGACtgtcaaaatgtgtatttcccaTAATGCAAAGCAGGCTCTGAGACATAGTTAATTAGTccataaagtattttctttggGGGGTGGGCGGTGGGAAGCTAAATTACTGATGAATCGAGAAACACGCCAATGGTGTAAACTACTCCGTCACAAGCTGTCATCTGTAAAGACCCTCGCTCACCCTTGGATTCCTAGAAAAGCTTTCctaacagctttttttttttagcttttaacAGCCTCTCCTGTGCTGTAAAAAGTGGGCGGGCGCTCAGGAAAGGGAGAGGGGTGGGAGCGGTGGGGCGGTGGCGGTTACATTCTCAGTTCTGAGAGGgacggtggggggggggggtatccAGATCACTTGCACATCCTCAGCACCTCCTGCATGCGCCTCTGCACGTCCTCCATCTTCTCGGTCCACTCTTCGCTCAGCCCCTCCTCGTCGTCGCCCACCACGGCCGCGTAGCCCATGAGTGCGATCAGCCCGATGCAGAACAGGTAGGTGAGCCGGGTGCAGAGGCGCTCCATGGCCCTGCGGTCCCCCCCCGAGTGCTTCATGTACACCTCCAGGATGGGCTTGCTGAAGAGCTTGGGTTTGCCCATGACGCCGTCGTACAGCGAGTGCAGGTTCTGGTCGCCCAGGTCGTTGCTGTAGCTCTCCTCGAAATCCTCCCTCTTGCGGCCCTGCAGTCGGACCTGAAAGGACAGCCGGGAAGAGACAGGTCACTGACCGTGTACCGGGATCAACGCAAGGGACTGCACTGTCAGTTGGCAGAACAGTGAACCCATGCATTCAACATATACAATGCAGAGGACAGTGTGTGATGTAAATACAACTGAAAACTCATTTCTGTGCCTATCTTTTTACATTTAGTGATTTTgtcaaaacagcaacaaattaAAGAATTGTTAAGCATTATCAATAAAGGAAAGGTAGGTTTAGTCAGTAACTTGTCGAAAATACAGAGAACTGAATAGGGTTAATGCAGCCTTGATCTCTTACAGCGATGTCAGTCAGGGAGAACTGAACTACAAAAACATGTCATACTTAGACATACTTTGCCTGGAATTACTACAGTAACCCCCTTAAGTGCAGGGATGACTGTAAACAGACCGTATGCAGGGATGTGCAAGACACAGAGACGTAGTCCGGCCACACCTCTGTCATTAGTCGTGTTTACTACGGTTCTCCCTGCTCGCGTTTATCTCGTGGATGTGGCTAACGATGTTGTGAAATGTCTCTCGTGTCACTTTTGGTGAGTGTCTTCAGACCTCCTGATTTTAGCACAAGGGCTGTTCTCAGTTACAGAggctctttctgtgtgtgtcagtaaaaaaaaaaaaaaaaaggaaaaaaaagactgcattgcagtaaaatgaaaaagaggaGCAGCTTTTCTGTAACAAACAACAGTGAACTACTTATGATAGAGCACACGAGTATAGGAAATGGATATTACATGGATATAGatgtaaatacatatgaaaaacaGCTAGACATGCACTCAGAGACAATATAATGGCTTATCCTTCTCTTTCTCATCCTACAATACCAGTTCTGATCTCTCAGGAGTCTCATTCATCTCGACATTGTCTGAGGATTTACGTCCTGTTTGCTGTATTTGTGCTGCATCATCAAGCAAAGCTTCTAGGCCCGATTTAGTGTCACAgaaatggatacatttaatcatttaacgTGTACAAGATGCATAAATCCACAGCTCGGTGTGATGACTTACCTGCGAGTTCGGTTCTTCTGTCACTTCCTACAAGATCTGTTGTTTTGTGCTACCAGCCACCATTTCACTCCCAACTGCCCCTGTCAGGCCTCGCCTCTATACCATACTTAGCTCGGGGAAGAGGAAGTGACTCACAGGGAGCGCTACAGCGATTGGGTTAGAAGAATGCTGTCAGCCAGCAATCCACAGAGCCGAGGCACCGCCTTCTCAACGTGAGGGAGGACAAGCAGGACAGGCAGGATCTATCAGACAGACCTCTGTGGATTCAGATAATCCAGGCCTTGCCATTTACCGTTGATAAAGGCCACGCGTTAGCTGGCTTGATTCTGCAGGTGTCCTCGGAGGGAGAGATGAGTGGATGTGTCGGTATCGGGGAGGTGGTTGATGTCTTTTTTGGGAGAGCGTCACCCTGGGGAGATGGAGGAGAATAGgcccTGGATGTCTGTGTTTTAACAAAGGCATATTTCGTTGTTGCACCTGTGAACCAGAAAAATCTTCATGAAGGGAATGCAAGTATAAACGAATCGAGATCAGAGCTCTAATTCTCTGAACATATTGTGTGCGGTCTGTCAGACTGCGCCagattacattcatatttgtattgcgGTTCACAGAATCTCTAATAAAAGTCGGTTAAAGAGAGTTGTCGGTCTCTTTTATTGTGTTTGCTGGTACCTTTCTTTAGTACGCC

Function

NR:

description
uncharacterized protein LOC103039167

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171278 True 4998 lncRNA 0.44 4 16957458 16978213

Neighbor

gene id symbol gene type direction distance location
AMCG00012360 NA coding upstream 57023 16877377 ~ 16900435 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding upstream 139019 16812785 ~ 16818439 (+)
AMCG00012350 NA coding upstream 241483 16713346 ~ 16715975 (+)
AMCG00012347 NA coding upstream 286759 16650333 ~ 16670699 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 420213 16530753 ~ 16537245 (+)
AMCG00012369 NA coding downstream 15266 16993479 ~ 16997064 (+)
AMCG00012367 NA coding downstream 44446 17022659 ~ 17029088 (+)
AMCG00012370 NA coding downstream 63982 17042195 ~ 17051046 (+)
AMCG00012368 NA coding downstream 78317 17056530 ~ 17063053 (+)
AMCG00012375 NA coding downstream 154349 17132562 ~ 17133006 (+)
G136297 NA non-coding upstream 163 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 42763 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 50353 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 125656 16829050 ~ 16831802 (+)
G136195 NA non-coding upstream 325194 16620255 ~ 16632264 (+)
G136351 NA non-coding downstream 186763 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 311932 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 322314 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 352581 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 361365 17339578 ~ 17340736 (+)
G136258 NA other upstream 81858 16871838 ~ 16875600 (+)
G136255 NA other upstream 90010 16866537 ~ 16867448 (+)
G136245 NA other upstream 93865 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 192350 16733426 ~ 16765108 (+)
AMCG00012349 LOC106588560,LOC106570198 other upstream 251265 16674279 ~ 16706193 (+)
AMCG00012374 NA other downstream 147800 17126013 ~ 17129339 (+)
G136341 NA other downstream 148942 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 406723 17384936 ~ 17388799 (+)
G136489 NA other downstream 433548 17411761 ~ 17476097 (+)
G136499 NA other downstream 481271 17459484 ~ 17466059 (+)

Expression


Co-expression Network