G136296


Basic Information

Item Value
gene id G136296
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16963330 ~ 17000089 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171279
CGAGGGCATTAGGATCTCATCctgtttattaacaaaaaaaaaaatgacagacaGGAACAGCATCGGAGtagttcaaaataaaaacagagcaaATATTACAAAGTGGCTGCGGTGCAACGGTCTATACAGCTCTTCGGCTTTCCGGGAAGGTTTTTCCGTTTTCATTCTTATCAGTAGTTGGAATGTAAAGAGAACTGTGCAAAGAATTGCAGGGGTGGATGAGCATCTTTGGACTTAAGACTTTGGGAAcatcagggggaaaaaaaacaaacagcaatacaGCTCGAGCGACCTGTGTAAGAAAGGGCAGTCTGAAGCGGACGCCGCCTCCTGGGCTTTCCAGACGGAGGcagatgtctctctctctctccatgcgGCACTGCGGTCTCAATGACATTGACTCAGGACCTCCTGCATCTTGGCTTGGATGTCCACCACCCTCTGGGTCCACTTGCACTTCACGTCGTCCTCGTCGTCCTCGATGACGGCGGTGTAGGCCATGAGCGAGATGAGCCCGATGTGGAACAGGTTGGTCAGGTGGGAGCACCTCTGCTCCATGACCTTGATGTTGCCGTCGCAGTGCTCCATGTAGACCTTCAGCAGAGGCCTCCCGAAGGCCCGGCGCGTCCCCATCACCCCGTAGTAGAACACGTCCAGGCTCAGCTCGCCCTTGTCTCTCTCGTACGTGTCCTGGAAGTCCTGCAAGTGGCTCTCCTTGTGTTCCGGGTCGGTCTTCACCATTTCTACCATGCTGCTGAAGGCCTGGTACTGGTGTTTGAGGTACTCCTCGTACTTGGAGAAGGTCTCGTGGATCTCGTCGATGCGTATCTGCTTCAGGGTCTGCCTGTTCTGCTGCGAGATGCTCTCCAGCTTGGTGTGGACCGTCTGGAACTCCTCCTCCAGGGCGTTGGCCTCCTCGTCGTAGACGCCCTTCCGCACGACGGCCACCAGGGAGGTGACGATGCCAAAGAGGGGGTCGATGGAGGTGGCGAAGGAGGAGACTTTCTCCACGCAAGACAGCACCTTGGCGGCCGTCTTCCTGATGTTCTCGGCCTCCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171279 True 1061 TUCP 0.55 2 16963330 17000089

Neighbor

gene id symbol gene type direction distance location
AMCG00012360 NA coding upstream 62895 16877377 ~ 16900435 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding upstream 144891 16812785 ~ 16818439 (+)
AMCG00012350 NA coding upstream 247355 16713346 ~ 16715975 (+)
AMCG00012347 NA coding upstream 292631 16650333 ~ 16670699 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 426085 16530753 ~ 16537245 (+)
AMCG00012367 NA coding downstream 22570 17022659 ~ 17029088 (+)
AMCG00012370 NA coding downstream 42106 17042195 ~ 17051046 (+)
AMCG00012368 NA coding downstream 56441 17056530 ~ 17063053 (+)
AMCG00012375 NA coding downstream 132473 17132562 ~ 17133006 (+)
AMCG00012376 NA coding downstream 159356 17159445 ~ 17168083 (+)
G136297 NA non-coding upstream 6035 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 48635 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 56225 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 131528 16829050 ~ 16831802 (+)
G136195 NA non-coding upstream 331066 16620255 ~ 16632264 (+)
G136351 NA non-coding downstream 164887 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 290056 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 300438 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 330705 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 339489 17339578 ~ 17340736 (+)
G136258 NA other upstream 87730 16871838 ~ 16875600 (+)
G136255 NA other upstream 95882 16866537 ~ 16867448 (+)
G136245 NA other upstream 99737 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 198222 16733426 ~ 16765108 (+)
AMCG00012349 LOC106588560,LOC106570198 other upstream 257137 16674279 ~ 16706193 (+)
AMCG00012374 NA other downstream 125924 17126013 ~ 17129339 (+)
G136341 NA other downstream 127066 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 384847 17384936 ~ 17388799 (+)
G136489 NA other downstream 411672 17411761 ~ 17476097 (+)
G136499 NA other downstream 459395 17459484 ~ 17466059 (+)

Expression


Co-expression Network