G136297


Basic Information

Item Value
gene id G136297
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16956689 ~ 16957295 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171280
ATGTCAAATAACAACGCAGTAACAGCACAGATATAGAGAGAACGTACAAACAAGTGGgaacaaatgaagaaaatgcctttttagaaagaaaagtcttaaaacaagatttaaaagcactttaaaaacCCTGATTTCTAGCGGAATTGTGTTCAATACAGCTCCCAGCCCACAGGAGGGACACAGAGGAGTCTGGGAGCAGTGGAGTGAAGACTATAGCTCTCAGGGCTTTGGAGGATAAAATATCAGTGAGGTAAAGCGGAGCAGTGCTTACAGAtgtgcacatttaaaattagttcGCATTAAATGAAAGAATGATGTCCCAATTTAACACAAAAGGCCATAATTTATTTCCGTTATTTCTAATTCTGGAGCTGTGAAAAGTTTCTACAGAACAACGTCAATCACTGGCGAATACATATATcgatttatttacacatatttacttattctaacaaataatattgaataagggGTATCAGTAATAAAGCGAAGCATCCGCGGCTGCTGCTCTTAATCAATGCGCCTTCATACAATGAGTAATTTAGATGAATCGTCAGATTATTAATCATTAAGTGGTTTAATGATGAAGACTACATCGCCACCTTGT

Function

NR:

description
PREDICTED: synaptotagmin-14-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171280 True 607 lncRNA 0.37 1 16956689 16957295

Neighbor

gene id symbol gene type direction distance location
AMCG00012360 NA coding upstream 56254 16877377 ~ 16900435 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding upstream 138250 16812785 ~ 16818439 (+)
AMCG00012350 NA coding upstream 240714 16713346 ~ 16715975 (+)
AMCG00012347 NA coding upstream 285990 16650333 ~ 16670699 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 419444 16530753 ~ 16537245 (+)
AMCG00012366 NA coding downstream 20277 16977572 ~ 16984994 (+)
AMCG00012369 NA coding downstream 36184 16993479 ~ 16997064 (+)
AMCG00012367 NA coding downstream 65364 17022659 ~ 17029088 (+)
AMCG00012370 NA coding downstream 84900 17042195 ~ 17051046 (+)
AMCG00012368 NA coding downstream 99235 17056530 ~ 17063053 (+)
G136286 NA non-coding upstream 41994 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 49584 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 124887 16829050 ~ 16831802 (+)
G136195 NA non-coding upstream 324425 16620255 ~ 16632264 (+)
G136191 NA non-coding upstream 390458 16565899 ~ 16566231 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding downstream 163 16957458 ~ 16978213 (+)
G136351 NA non-coding downstream 207681 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 332850 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 343232 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 373499 17330794 ~ 17332570 (+)
G136258 NA other upstream 81089 16871838 ~ 16875600 (+)
G136255 NA other upstream 89241 16866537 ~ 16867448 (+)
G136245 NA other upstream 93096 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 191581 16733426 ~ 16765108 (+)
AMCG00012349 LOC106588560,LOC106570198 other upstream 250496 16674279 ~ 16706193 (+)
G136296 NA other downstream 6035 16963330 ~ 17000089 (+)
AMCG00012374 NA other downstream 168718 17126013 ~ 17129339 (+)
G136341 NA other downstream 169860 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 427641 17384936 ~ 17388799 (+)
G136489 NA other downstream 454466 17411761 ~ 17476097 (+)

Expression


Co-expression Network