G136378


Basic Information

Item Value
gene id G136378
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17093499 ~ 17133907 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171386
ATCAATATTAATGCCCGTCTCCCTCTCTGGGTGTAttagcccctctctctccactctcaTACCCCAGGGCCGGGCCGCTGCAGGGTTGACCAGCTCCTGCAGGTGTGACACAGGCACCTGTCAGGCAGCGTCAGCCATGCGGGTCTAATCTGTCCaagtgtgaagaaaaaaaaaaagcaagccaCTTTGGAGAccattgcttttgtttctctttattaCCGCCGTCATTCTCGCCAGCAGCCGGCAGCAGTAACTGAGCACCAGTCCACCGCTGCCGGTGAAGCAGAAATGGCATGAGGGCATTACAGGGCATAAGCATAGAGTACAAGGTAGGCGACACATTTCGTCTGTAACAATGTCttcggtttgtttgtttgtttgggcaAAGGTATATAAAGACAACATTATGCCAAGAACGGCAGGATCAGATGGGAAGAGTTAAGATTTCTCAGAGCAACAAAAGTCAAAAGCGTTGTTTTCACTGTAGTGTTGTTACTGCGTTGACACTGTTTTGCACAGTGTTGTTGTAGTGTTGTGTTGTCATGTTTACTGCAGTGACACTGTTTTGCACCGTGTTGCTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTGTGTTGTCACGTTACTGCAGTGACAGTGTTCGCTGTAGTCTCGTAGTGAGGACATTGTTGTTAGGTGTGTATCAGTTGTTTCGGCCCTGTCTCGGGTGTCTTGACATGTGTCCGGTGCGTCTTGGCTGCGTCTTGGCTGCGTCAGCCCTGGGTCTCGGGCTGCTGGGTGGCCGCGGAGCGCTGCTCGCTCAGGGTATTGGCGATGTAGCCGATCAGCGTCATGAACTCGGGGAAACTCACTTTCCCGTCCTTATTGTCGTCCAGACCCTCCTTCATCTCATTCACGGCCTTTTTACTGTCTgtgtcctgagagagagagagagagagtgtaaggcaaagtagtgcagtgcagtgtagtatggtgcagtgtagtgcagtgtccccctgtcctctctctgcGGGTCTCCTGTACCGTTAGGATGTTGCCCAGCTGGCTATGCACCATTTTCTGGAAGTCTTTGCCCCCCATCGAGTCACGGCCCTTGGAGGCGCTCTGGAACACTTTCACTATGGTCATAATGGCAGACTCCATCTCTTGCTGCGGGACGGACAGGCGGACGGACTGGACAGAGGGACGGCTGGCAAGCTGtaggacagagagacaggaaaaaaGAGTGGGCGGAGAGAagcttaatattattattattatgatgtccAGTATTATAACTTAATTGTATGGTGGGGGGGGTTACAGGGTACAGTCAGAAACTCACTCACTGCCTCAATCGCTCACTACCTAACTCACTTTCTCACTGCCttactcactctcactcactacctaactcactcactctctcactgcctcactctctctcactcactgcCTTACTCTCACAGACTCACTCTCTCACTATCGCACTCTGACTCACTCACTACCTCACTCTCCCACCCTTTCACTGCCTTACTCTCAC
>TU171387
ATCAATATTAATGCCCGTCTCCCTCTCTGGGTGTAttagcccctctctctccactctcaTACCCCAGGGCCGGGCCGCTGCAGGGTTGACCAGCTCCTGCAGGTGTGACACAGGCACCTGTCAGGCAGCGTCAGCCATGCGGGTCTAATCTGTCCaagtgtgaagaaaaaaaaaaagcaagccaCTTTGGAGAccattgcttttgtttctctttattaCCGCCGTCATTCTCGCCAGCAGCCGGCAGCAGTAACTGAGCACCAGTCCACCGCTGCCGGTGAAGCAGAAATGGCATGAGGGCATTACAGGGCATAAGCATAGAGTACAAGGTAGGCGACACATTTCGTCTGTAACAATGTCttcggtttgtttgtttgtttgggcaAAGGTATATAAAGACAACATTATGCCAAGAACGGCAGGATCAGATGGGAAGAGTTAAGATTTCTCAGAGCAACAAAAGTCAAAAGCGTTGTTTTCACTGTAGTGTTGTTACTGCGTTGACACTGTTTTGCACAGTGTTGTTGTAGTGTTGTGTTGTCATGTTTACTGCAGTGACACTGTTTTGCACCGTGTTGCTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTGTAGTGGGgacagtgttgtgctgtgtttgcTGTAGTGTTgtgcgagagagagagagagagagggggggggtaataagagctgggctgggctgCCAGTACTGCAAGTATacacctccctccctcgctccctccctcttcaGCCGGAGGTGTGCCAACGATATTGACTATCTCTCACTAGAGAccgtgagacagacagacagacagtagtAACAGAGAGAGGAACCACAGAGGCAGGCATGCAGGGAGGCGAGCGGTAGTGGAGTGACACAAGGATCGTGGGTTCGTTTTtcgttgtttttctttcttacagaCAAACGACTAgagactgacagagacagagacagagacagagagactgtgAGACTGACAGAGGGAGTTTGTGACACCAGTACAGAGGAGGAAGTTGGGGGACGGGACAGGAAGACAGGACGCCAGGTAGACGTAGAGTCAggtgcacagacacacactggaggacagacagagacacacacactgacagagactCACGCATACACACCATGAAGGTTACTGGGATCATGCTGGCCTCGTCCTGCCTGTCCGCCGCCATAATGCTGGGGTCGCTGTACCTGCGGGAACAGCGGGCCAAGGAGCTGCGCATCAAGGTGGAGTTCCTGGAGACAAAGCTGCGCATGACGGAGGAGGTGGCCGGCCAGTTCCGGGATGAGCTGACGCTGTACATCGCCGCGGAGGGCAAAGCCCACCAGGAACAGGCCGATCTGCAGGGGGTGCTGGACATGGCCGAGCAGCAGCTGCAGAGCCACAGGGAAAGCTCACAGGCCTGCGAGACCGAGAagAACCAGCTGGATGAGAACTTCAAAGCTGCAcagacagagctgcagaataGCAAAGGTCAGATGGACCAGGAGAGGGATCGTTGGACTGTAGACATCAATAACCTGAAACAGCAGGTGGCGCTCAAGAGCAAAGTGTGTGACTTTGTGGACCAGAATTCACCAGAGGGCAGGAAGATGTGCGGCCTGCCCCCCATAGCAGAGCCCCCCAAGGTAGAACCCCCGAAGGCAGAGCCCCCGAAGGAAGAGCCCAAGAAGGAGGAGCCCAAGAAGGAAGAGCCCCCCAAGGCAGAGCCCCCAAAGGAAGAGCCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171386 False 1616 lncRNA 0.51 2 17132237 17133907
TU171387 True 1793 TUCP 0.54 5 17093499 17133907

Neighbor

gene id symbol gene type direction distance location
AMCG00012373 NA coding downstream 11292 17080907 ~ 17082207 (-)
AMCG00012371 NA coding downstream 103390 16985862 ~ 16990109 (-)
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding downstream 127628 16960383 ~ 16965871 (-)
AMCG00012361 NA coding downstream 141668 16945305 ~ 16951831 (-)
AMCG00012362 NA coding downstream 169515 16922806 ~ 16923984 (-)
AMCG00012384 NA coding upstream 112183 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 130856 17264763 ~ 17267311 (-)
AMCG00012390 NA coding upstream 210447 17344354 ~ 17364449 (-)
AMCG00012394 NA coding upstream 326016 17459923 ~ 17465336 (-)
AMCG00012399 adar coding upstream 374017 17507924 ~ 17511092 (-)
G136382 NA non-coding downstream 142 17092543 ~ 17093357 (-)
G136376 NA non-coding downstream 36498 17056612 ~ 17057001 (-)
G136372 NA non-coding downstream 53533 17039337 ~ 17039966 (-)
G136307 NA non-coding downstream 137140 16956142 ~ 16956359 (-)
G136226 NA non-coding downstream 381866 16709574 ~ 16711633 (-)
G136391 NA non-coding upstream 11515 17145422 ~ 17148086 (-)
G136409 NA non-coding upstream 58834 17192741 ~ 17193982 (-)
G136411 NA non-coding upstream 63328 17197235 ~ 17198702 (-)
G136423 NA non-coding upstream 126081 17259988 ~ 17261894 (-)
G136435 NA non-coding upstream 155192 17289099 ~ 17290083 (-)
AMCG00012365 NA other downstream 178814 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 393708 16699475 ~ 16699791 (-)
G136222 NA other downstream 394389 16698642 ~ 16699110 (-)
AMCG00012340 NA other downstream 660686 16415107 ~ 16432813 (-)
G136125 NA other downstream 779106 16312721 ~ 16314393 (-)
G136412 NA other upstream 67867 17201774 ~ 17203233 (-)
AMCG00012385 NA other upstream 74871 17208778 ~ 17217639 (-)
G136408 NA other upstream 100021 17233928 ~ 17242827 (-)
AMCG00012391 NA other upstream 246273 17380180 ~ 17381595 (-)
AMCG00012393 NA other upstream 282667 17416574 ~ 17434113 (-)

Expression


Co-expression Network