G136408


Basic Information

Item Value
gene id G136408
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17233928 ~ 17242827 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171426
TATTTCTGTTCAAAAcgtaataaaacattttattctgttattatttgcACCCAGCAggctttgatttttttaatacatgtatacaaagagatggagggagggaggagactCTCTCTGCCTGAACACTGCCAATGCGATGTAGAGGCCAGAGGAGTGGGTTTGTGGGGGCGGGTTCAATTGAGGGGGTCTGCAGTGTGGTACTGGAGGACTGTGCCTAGGGGGCGCCTCTCACTTCTTCTTAGGCTTGAACTCGTGGCACATACAGGCGAGCACTGCCACCAGGGTGACGTACTCCTGGAAATCCACTGTGCCAGATTTGTCCTGGTCCAGCTGTTTCAAGAAGTCATCTACCTGTGCCGGGTTTTGGGGGTTCCAAGAAGCCTGTCAGCTCCTTCTCCAGCAGCTCTTTGACCTCAGGTTTGCTGAGGGAGTTGGGGTCACCATCTTTGCTGGCGTACTTGGTGAAGACACCCAGCATGGTTGTGATTGCATTCATCAAATCAGACATATTGGTGGAGAGAAGAATctacctgcagagagagagagagagagagagagagagagagagagagagagagagaaagagagagagagaagtcaaTCCATACATGCATCAAAATTAGACTGCAGGGCATGACGTCATAAGAGCAGGACAGTctacctgcagagagagaggggggtgagTTAGGTggagcttttattttattaaacaactCGTG
>TU171427
ACAGGCGTCATCCCTCACCAAGAAGCCTGTCAGCTCCTTCTCCAGCAGCTCTTTGACCTCAGGTTTGCTGAGGGAGTTGGGGTCACCATCTTTGCTGGCGTACTTGGTGAAGACACCCAGCATGGTTGTGATTGCATTCATCAAATCAGACATATTGGTGGAGAGAAGAATctacctgcagagagagagagagagagagagagagagagagagagagagagagagaaagagagagagagaagtcaaTCCATACATGCATCAAAATTAGACTGCAGGGCATGACGTCATAAGAGCAGGACAGTctacctgcagagagagaggggggtgagTTAGGTggagcttttattttattaaacaactCGTG

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171426 True 719 TUCP 0.49 3 17233928 17242827
TU171427 False 364 lncRNA 0.48 2 17233928 17242006

Neighbor

gene id symbol gene type direction distance location
AMCG00012373 NA coding downstream 151721 17080907 ~ 17082207 (-)
AMCG00012371 NA coding downstream 243819 16985862 ~ 16990109 (-)
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding downstream 268057 16960383 ~ 16965871 (-)
AMCG00012361 NA coding downstream 282097 16945305 ~ 16951831 (-)
AMCG00012362 NA coding downstream 309944 16922806 ~ 16923984 (-)
AMCG00012384 NA coding upstream 3263 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 21936 17264763 ~ 17267311 (-)
AMCG00012390 NA coding upstream 101527 17344354 ~ 17364449 (-)
AMCG00012394 NA coding upstream 217096 17459923 ~ 17465336 (-)
AMCG00012399 adar coding upstream 265097 17507924 ~ 17511092 (-)
G136411 NA non-coding downstream 35226 17197235 ~ 17198702 (-)
G136409 NA non-coding downstream 39946 17192741 ~ 17193982 (-)
G136391 NA non-coding downstream 85842 17145422 ~ 17148086 (-)
G136392 NA non-coding downstream 104629 17126206 ~ 17129299 (-)
G136383 NA non-coding downstream 129471 17102403 ~ 17104457 (-)
G136423 NA non-coding upstream 17161 17259988 ~ 17261894 (-)
G136435 NA non-coding upstream 46272 17289099 ~ 17290083 (-)
G136437 NA non-coding upstream 47313 17290140 ~ 17290396 (-)
G136450 NA non-coding upstream 60099 17302926 ~ 17310050 (-)
G136470 NA non-coding upstream 72081 17314908 ~ 17318479 (-)
AMCG00012385 NA other downstream 16289 17208778 ~ 17217639 (-)
G136412 NA other downstream 30695 17201774 ~ 17203233 (-)
G136378 NA other downstream 100021 17093499 ~ 17133907 (-)
AMCG00012372 tpm3,LOC106570192 other downstream 135203 17064556 ~ 17098725 (-)
AMCG00012365 NA other downstream 319243 16911492 ~ 16914685 (-)
AMCG00012391 NA other upstream 137353 17380180 ~ 17381595 (-)
AMCG00012393 NA other upstream 173747 17416574 ~ 17434113 (-)
AMCG00012392 NA other upstream 231821 17474648 ~ 17483359 (-)
G136544 NA other upstream 260791 17503618 ~ 17503986 (-)
G136625 NA other upstream 443505 17686332 ~ 17688512 (-)

Expression


Co-expression Network