G136412


Basic Information

Item Value
gene id G136412
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17201774 ~ 17203233 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171432
ccTCTACACTGCAGGCTGATTTTGCTCTGAACATCTACCAAATAGCTGTTAGTATTATGCTTTGGATTTTACCTTTAAATGTCAGAGTAATTCTGCTATGACCTGATTGCAATCGAGCAAAATACTTGTACACTTGTAATTCAGACTCACACAAGACCAcaccagagaagaaaaacatgctGCCATTAATACTTTCATTATGATGCAACCATGGTAGTTATTTGCGGttaatgacaaacaaacacacacactaacacactaaTACAGGTGCTTGCAGAGGCCATATAGCAATCGCAGGAATGAGAGAGATTGGATGGAGAGCAGGGCAGGAGGTATTGCGTGGCACTTTGGCATCAGCCTCAGATAGTGTCTCCACAACAACAGatccatcctcctctccctAGTGCCCATCTTTATATATAACGCAGGGCAGAGCGAGTCTCACTCACACAGCAAGCTTTTCTCATTCCTACCTGAGCAGgCTCCACTATCCTACACTGACCATGTCTCTGGCTGAAGCTGCACGCATCGTGTCCGAGGTGTTCAATAAGTACGCCGCTGAGGACCAGCACAAGGACACACTGAGCCCAATCGAGCTCAAGAAACTGCTGCAGGCTGAGTGCAGCACGAAGggATCAATCTGCACTTCAAAGTTGGACGAGGTGATGAAACGCCTGGATAACAACATGGACGGACAGATCGACATCGTGGAGTTTGGCACTCTGATCGGCATGATGGCCAAGcgaatgtgagagagagagagagacactcctcccacccccaaccccccctccccatcttcTGCTTGAACAACAGAGATGCTGGAGAGAGTGAGGGATGGAGGGAAGGAgcgggagagaggagggaggagtttaTCTTTCCTCTGTAGaataactaaaatgaaaataaatatacattgacATTAAAATCA

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU171432 True 931 TUCP 0.47 3 17201774 17203233

Neighbor

gene id symbol gene type direction distance location
AMCG00012373 NA coding downstream 119567 17080907 ~ 17082207 (-)
AMCG00012371 NA coding downstream 211665 16985862 ~ 16990109 (-)
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding downstream 235903 16960383 ~ 16965871 (-)
AMCG00012361 NA coding downstream 249943 16945305 ~ 16951831 (-)
AMCG00012362 NA coding downstream 277790 16922806 ~ 16923984 (-)
AMCG00012384 NA coding upstream 42857 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 61530 17264763 ~ 17267311 (-)
AMCG00012390 NA coding upstream 141121 17344354 ~ 17364449 (-)
AMCG00012394 NA coding upstream 256690 17459923 ~ 17465336 (-)
AMCG00012399 adar coding upstream 304691 17507924 ~ 17511092 (-)
G136411 NA non-coding downstream 3072 17197235 ~ 17198702 (-)
G136409 NA non-coding downstream 7792 17192741 ~ 17193982 (-)
G136391 NA non-coding downstream 53688 17145422 ~ 17148086 (-)
G136392 NA non-coding downstream 72475 17126206 ~ 17129299 (-)
G136383 NA non-coding downstream 97317 17102403 ~ 17104457 (-)
G136423 NA non-coding upstream 56755 17259988 ~ 17261894 (-)
G136435 NA non-coding upstream 85866 17289099 ~ 17290083 (-)
G136437 NA non-coding upstream 86907 17290140 ~ 17290396 (-)
G136450 NA non-coding upstream 99693 17302926 ~ 17310050 (-)
G136470 NA non-coding upstream 111675 17314908 ~ 17318479 (-)
G136378 NA other downstream 67867 17093499 ~ 17133907 (-)
AMCG00012372 tpm3,LOC106570192 other downstream 103049 17064556 ~ 17098725 (-)
AMCG00012365 NA other downstream 287089 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 501983 16699475 ~ 16699791 (-)
G136222 NA other downstream 502664 16698642 ~ 16699110 (-)
AMCG00012385 NA other upstream 5545 17208778 ~ 17217639 (-)
G136408 NA other upstream 30695 17233928 ~ 17242827 (-)
AMCG00012391 NA other upstream 176947 17380180 ~ 17381595 (-)
AMCG00012393 NA other upstream 213341 17416574 ~ 17434113 (-)
AMCG00012392 NA other upstream 271415 17474648 ~ 17483359 (-)

Expression


Co-expression Network