G136486


Basic Information

Item Value
gene id G136486
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17402019 ~ 17402360 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171521
AGTGAGCCGGTGCTGGAAGCGCGTCTGATCTCCCGTGTTTGTTTGCACTGCAGGACATTGAGAACTGGGACTCGCTTTTTGTGTCGTCGTCGTCGTTGTTTTGCTGCTATCTGTCCGTGTTGCGGTGGGTCTGCATCACAGCACCGCCTCCCTGCTCTACCCGCACGCCGCGATGGACGTGTTGTGGATGGTGTGCGTGGCCGTGGCTGCGGGGGTCGCCGCGGCGGAGAGGCACAGCGTGTACTGGAACAGCAGCAACCCCAAGTGAGTGCCTCGCCGGCCGCAGGGTGCGTGTGCTGTGCGTCTGCGGGCCGGTTGGGACCCGGTGCTGTGCGATCGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171521 True 342 lncRNA 0.64 1 17402019 17402360

Neighbor

gene id symbol gene type direction distance location
AMCG00012386 NA coding upstream 21898 17374960 ~ 17380121 (+)
AMCG00012388 krtcap2 coding upstream 30466 17369263 ~ 17371553 (+)
AMCG00012389 LOC107549236 coding upstream 112124 17269066 ~ 17289895 (+)
AMCG00012377 NA coding upstream 143420 17255412 ~ 17258599 (+)
AMCG00012379 NA coding upstream 159190 17238280 ~ 17242829 (+)
AMCG00012395 chrnb2,chrnb2b,LOC106575520,LOC104959165 coding downstream 95094 17497454 ~ 17504572 (+)
AMCG00012396 ilf2,LOC106588321,LOC106569884 coding downstream 127413 17529773 ~ 17537629 (+)
AMCG00012397 NA coding downstream 150226 17552586 ~ 17578771 (+)
AMCG00012406 ints3,LOC106588323 coding downstream 179016 17581376 ~ 17598072 (+)
AMCG00012404 syt11 coding downstream 203373 17605733 ~ 17609903 (+)
G136458 NA non-coding upstream 61283 17339578 ~ 17340736 (+)
G136457 NA non-coding upstream 69449 17330794 ~ 17332570 (+)
G136444 NA non-coding upstream 97020 17300527 ~ 17304999 (+)
G136436 NA non-coding upstream 111490 17290145 ~ 17290529 (+)
G136351 NA non-coding upstream 229913 17164976 ~ 17172106 (+)
G136490 NA non-coding downstream 16855 17419215 ~ 17462685 (+)
G136538 NA non-coding downstream 85990 17488350 ~ 17488827 (+)
G136539 NA non-coding downstream 86959 17489319 ~ 17489544 (+)
G136564 NA non-coding downstream 220753 17623113 ~ 17635961 (+)
G136568 NA non-coding downstream 246268 17648628 ~ 17649107 (+)
AMCG00012387 NA other upstream 13220 17384936 ~ 17388799 (+)
G136341 NA other upstream 137615 17127155 ~ 17264404 (+)
AMCG00012374 NA other upstream 272680 17126013 ~ 17129339 (+)
G136296 NA other upstream 401930 16963330 ~ 17000089 (+)
G136258 NA other upstream 526419 16871838 ~ 16875600 (+)
G136489 NA other downstream 9401 17411761 ~ 17476097 (+)
G136499 NA other downstream 57124 17459484 ~ 17466059 (+)
AMCG00012401 adar other downstream 107012 17509372 ~ 17522821 (+)
G136558 NA other downstream 145008 17547368 ~ 17547968 (+)
G136566 NA other downstream 243281 17645641 ~ 17646905 (+)

Expression


Co-expression Network