Gene
RNA
| Item | Value |
|---|---|
| gene id | G136490 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17419215 ~ 17462685 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU171542 | True | 355 | lncRNA | 0.66 | 2 | 17419215 | 17462685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012386 | NA | coding | upstream | 39094 | 17374960 ~ 17380121 (+) |
| AMCG00012388 | krtcap2 | coding | upstream | 47662 | 17369263 ~ 17371553 (+) |
| AMCG00012389 | LOC107549236 | coding | upstream | 129320 | 17269066 ~ 17289895 (+) |
| AMCG00012377 | NA | coding | upstream | 160616 | 17255412 ~ 17258599 (+) |
| AMCG00012379 | NA | coding | upstream | 176386 | 17238280 ~ 17242829 (+) |
| AMCG00012395 | chrnb2,chrnb2b,LOC106575520,LOC104959165 | coding | downstream | 34769 | 17497454 ~ 17504572 (+) |
| AMCG00012396 | ilf2,LOC106588321,LOC106569884 | coding | downstream | 67088 | 17529773 ~ 17537629 (+) |
| AMCG00012397 | NA | coding | downstream | 89901 | 17552586 ~ 17578771 (+) |
| AMCG00012406 | ints3,LOC106588323 | coding | downstream | 118691 | 17581376 ~ 17598072 (+) |
| AMCG00012404 | syt11 | coding | downstream | 143048 | 17605733 ~ 17609903 (+) |
| G136486 | NA | non-coding | upstream | 16855 | 17402019 ~ 17402360 (+) |
| G136458 | NA | non-coding | upstream | 78479 | 17339578 ~ 17340736 (+) |
| G136457 | NA | non-coding | upstream | 86645 | 17330794 ~ 17332570 (+) |
| G136444 | NA | non-coding | upstream | 114216 | 17300527 ~ 17304999 (+) |
| G136436 | NA | non-coding | upstream | 128686 | 17290145 ~ 17290529 (+) |
| G136538 | NA | non-coding | downstream | 25665 | 17488350 ~ 17488827 (+) |
| G136539 | NA | non-coding | downstream | 26634 | 17489319 ~ 17489544 (+) |
| G136564 | NA | non-coding | downstream | 160428 | 17623113 ~ 17635961 (+) |
| G136568 | NA | non-coding | downstream | 185943 | 17648628 ~ 17649107 (+) |
| G136571 | NA | non-coding | downstream | 200748 | 17663433 ~ 17664170 (+) |
| AMCG00012387 | NA | other | upstream | 30416 | 17384936 ~ 17388799 (+) |
| G136341 | NA | other | upstream | 154811 | 17127155 ~ 17264404 (+) |
| AMCG00012374 | NA | other | upstream | 289876 | 17126013 ~ 17129339 (+) |
| G136296 | NA | other | upstream | 419126 | 16963330 ~ 17000089 (+) |
| G136258 | NA | other | upstream | 543615 | 16871838 ~ 16875600 (+) |
| AMCG00012401 | adar | other | downstream | 46687 | 17509372 ~ 17522821 (+) |
| G136558 | NA | other | downstream | 84683 | 17547368 ~ 17547968 (+) |
| G136566 | NA | other | downstream | 182956 | 17645641 ~ 17646905 (+) |
| G136569 | cks1b,LOC103032043,LOC108433716,LOC103358762 | other | downstream | 186580 | 17649265 ~ 17653462 (+) |
| AMCG00012417 | NA | other | downstream | 292735 | 17755420 ~ 17760282 (+) |
