G136539


Basic Information

Item Value
gene id G136539
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17489319 ~ 17489544 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171618
CTTATAGATAGTGGTATTTAACGTCACCCGATTTTACAGAGGAGTTCGCTATGGATAGTGGCTTTGGATCAGAGATGTGCGTGACGCATATTGTGACTATCGATTATTCCACAGCTGTTCCTCAACTATTTGAATAGTCCGGCCACCCAttcaaaatgtatgcatatctatagcacatttattataataagcATGTCTTACCACCTATCTGTAGCCTAGATTTCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171618 True 226 lncRNA 0.39 1 17489319 17489544

Neighbor

gene id symbol gene type direction distance location
AMCG00012386 NA coding upstream 109198 17374960 ~ 17380121 (+)
AMCG00012388 krtcap2 coding upstream 117766 17369263 ~ 17371553 (+)
AMCG00012389 LOC107549236 coding upstream 199424 17269066 ~ 17289895 (+)
AMCG00012377 NA coding upstream 230720 17255412 ~ 17258599 (+)
AMCG00012379 NA coding upstream 246490 17238280 ~ 17242829 (+)
AMCG00012395 chrnb2,chrnb2b,LOC106575520,LOC104959165 coding downstream 7910 17497454 ~ 17504572 (+)
AMCG00012396 ilf2,LOC106588321,LOC106569884 coding downstream 40229 17529773 ~ 17537629 (+)
AMCG00012397 NA coding downstream 63042 17552586 ~ 17578771 (+)
AMCG00012406 ints3,LOC106588323 coding downstream 91832 17581376 ~ 17598072 (+)
AMCG00012404 syt11 coding downstream 116189 17605733 ~ 17609903 (+)
G136538 NA non-coding upstream 492 17488350 ~ 17488827 (+)
G136490 NA non-coding upstream 26634 17419215 ~ 17462685 (+)
G136486 NA non-coding upstream 86959 17402019 ~ 17402360 (+)
G136458 NA non-coding upstream 148583 17339578 ~ 17340736 (+)
G136457 NA non-coding upstream 156749 17330794 ~ 17332570 (+)
G136564 NA non-coding downstream 133569 17623113 ~ 17635961 (+)
G136568 NA non-coding downstream 159084 17648628 ~ 17649107 (+)
G136571 NA non-coding downstream 173889 17663433 ~ 17664170 (+)
G136718 NA non-coding downstream 411364 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 772353 18261897 ~ 18269507 (+)
G136489 NA other upstream 13222 17411761 ~ 17476097 (+)
G136499 NA other upstream 23260 17459484 ~ 17466059 (+)
AMCG00012387 NA other upstream 100520 17384936 ~ 17388799 (+)
G136341 NA other upstream 224915 17127155 ~ 17264404 (+)
AMCG00012374 NA other upstream 359980 17126013 ~ 17129339 (+)
AMCG00012401 adar other downstream 19828 17509372 ~ 17522821 (+)
G136558 NA other downstream 57824 17547368 ~ 17547968 (+)
G136566 NA other downstream 156097 17645641 ~ 17646905 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other downstream 159721 17649265 ~ 17653462 (+)
AMCG00012417 NA other downstream 265876 17755420 ~ 17760282 (+)

Expression


Co-expression Network