G136564


Basic Information

Item Value
gene id G136564
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17623113 ~ 17635961 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171659
ACATCAAAGTTCAAACCAACTCTCCAGGCTTGTAGTGACAGGTGGCCCGACATAGGTAGCTCGAAACCGGAGCCCGGCTGACCCGTTGTCCCCCTTCGGTCTGGTTTATATCCCCGCCCGCTCGACCTTTCAGCACGCCTCGGTCGAGCCAGGCCGGCGCGGAGACCGACCGTTGAGTGCCCGTGGAGGCTAGGCCGCGCTGAGACCGGGGAGTGGAGTTGGCCGTCATCCCGGGCCGCAGTGATGGAGTCGTGGGTGCGGTTCAGCGCCCAGAGCCAGGCCAAAGAGCGGGTTTTCAGCAGCACACAAGCATACTGCGCAGCTCTGTGGGGGAGAGACACACAtggtaaatacacacacatgcatgatGAAGAGACACAGActaaagacacaaacacacacacatgcacgatAAAGATGCACATGGagtaaaaacacatgcagtaaagacacacacacaga

Function

NR:

description
PREDICTED: NF-kappa-B inhibitor alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171659 True 462 lncRNA 0.57 2 17623113 17635961

Neighbor

gene id symbol gene type direction distance location
AMCG00012407 rit1,LOC107672884 coding upstream 1926 17614494 ~ 17621187 (+)
AMCG00012404 syt11 coding upstream 13210 17605733 ~ 17609903 (+)
AMCG00012406 ints3,LOC106588323 coding upstream 25041 17581376 ~ 17598072 (+)
AMCG00012397 NA coding upstream 44342 17552586 ~ 17578771 (+)
AMCG00012396 ilf2,LOC106588321,LOC106569884 coding upstream 85484 17529773 ~ 17537629 (+)
AMCG00012405 NA coding downstream 21497 17657458 ~ 17662757 (+)
AMCG00012403 NA coding downstream 31382 17667343 ~ 17676356 (+)
AMCG00012402 NA coding downstream 40704 17676665 ~ 17679965 (+)
AMCG00012410 NA coding downstream 47433 17683394 ~ 17688471 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding downstream 53157 17689118 ~ 17691283 (+)
G136539 NA non-coding upstream 133569 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 134286 17488350 ~ 17488827 (+)
G136490 NA non-coding upstream 160428 17419215 ~ 17462685 (+)
G136486 NA non-coding upstream 220753 17402019 ~ 17402360 (+)
G136458 NA non-coding upstream 282377 17339578 ~ 17340736 (+)
G136568 NA non-coding downstream 12667 17648628 ~ 17649107 (+)
G136571 NA non-coding downstream 27472 17663433 ~ 17664170 (+)
G136718 NA non-coding downstream 264947 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 625936 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 659254 18295215 ~ 18317076 (+)
G136558 NA other upstream 75145 17547368 ~ 17547968 (+)
AMCG00012401 adar other upstream 100292 17509372 ~ 17522821 (+)
G136489 NA other upstream 147016 17411761 ~ 17476097 (+)
G136499 NA other upstream 157054 17459484 ~ 17466059 (+)
AMCG00012387 NA other upstream 234314 17384936 ~ 17388799 (+)
G136566 NA other downstream 9680 17645641 ~ 17646905 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other downstream 13304 17649265 ~ 17653462 (+)
AMCG00012417 NA other downstream 119459 17755420 ~ 17760282 (+)
G136641 NA other downstream 128184 17764145 ~ 17767531 (+)
AMCG00012423 LOC102799202,LOC107564869 other downstream 156290 17792251 ~ 17795244 (+)

Expression


Co-expression Network