G136566


Basic Information

Item Value
gene id G136566
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17645641 ~ 17646905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171661
ACTCCTCCCCTCTCgttcctcccctctcctccctcactgctcccctctcctccctcgtTTCTCCTCgttcctcctctctcctccctcactcCCCTCTCATTCCTCCCCACTCCTCCTTCACTCCTCCCTTCCCATGcagaagggagggagagaaagggaaggaaagagggagggcaggagagagggagatggagagggagagagggcaagagagggagagggagggtcCCACAGTGGAGCAGGACATGGATCTCACCCTTCTGTTGCGTTCCCTTCCATTGCATTACAgtctcgctccctccctctctccccctgtgcTGTTCATCCAAAGCATAGTATTCCCGGAATTAGATAATTGGATAACGAGCAATCAGAGAGAGATGTGGTTCCGGTACTCTGCAGATACTCACGGCTGGAGGCGTCAGAGCGCCGCTGTGAACCGCGTCTGTGACTCAGTGTCGCCCGCGAGCCGCCAGCTCCCCCAGCCTCTGTTACggcatgaatattcatgagacTGTGTGGGACTTTATTTAACACCTCGATACCGTGATCAAAACCAACACCATCGCCTTGATTTGTGATggattttgtttgcctttttaaaggggggagagagagagagaaagaaaaagaaagaaagaaaactttttttattcacGACAGAAAACTCATATTTTGGCGAGACGGGGCGGAGGAGCAGCTGTGCATTTCAGCACGcagtttgattattattattactgtctgCGTTGTGACTCCCGTGGGACAGTCACTCTTGTGTTTGTGGGGAGAGGTGCTCCGAGGGGCACaaaaaaatcccccccccccctcttggTTTTGGGAAGAGATGGGAATGTTGTCACACGGCTGCCTGGGAGAGGGAAGTGAGCTAAAGTAAGCAAGTGCAAAACCTTGAATTCGTTACTCTCTGGCTTGTTCCGAGGCCCTCGCGTTTGCCGCTTTGGATCGATGCAGCAGAGACTGGTTTTAAACCCTGGTTTCCTTAGCATTGTGTCCTGCCCGTGGCACTTGGTTTTGATCTGcatcattgtgttttattgctgcaCAGCGCCCACACTGTCCGCTCAGCCCTCGCTCTGCCTCCTCTGGTAGACCGACAGCCTCGAAGCCTCACCCCAGCTTTCTTTTCATTATGaatgttattactattattgtgtTGCTGTAGTCATTTGTCAggtatgtttaatgttttgtggTGTGACATGATTGCAACACCTAACTGCCGCTTcagtataaataaattgata

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU171661 True 1265 TUCP 0.51 1 17645641 17646905

Neighbor

gene id symbol gene type direction distance location
AMCG00012407 rit1,LOC107672884 coding upstream 24454 17614494 ~ 17621187 (+)
AMCG00012404 syt11 coding upstream 35738 17605733 ~ 17609903 (+)
AMCG00012406 ints3,LOC106588323 coding upstream 47569 17581376 ~ 17598072 (+)
AMCG00012397 NA coding upstream 66870 17552586 ~ 17578771 (+)
AMCG00012396 ilf2,LOC106588321,LOC106569884 coding upstream 108012 17529773 ~ 17537629 (+)
AMCG00012405 NA coding downstream 10553 17657458 ~ 17662757 (+)
AMCG00012403 NA coding downstream 20438 17667343 ~ 17676356 (+)
AMCG00012402 NA coding downstream 29760 17676665 ~ 17679965 (+)
AMCG00012410 NA coding downstream 36489 17683394 ~ 17688471 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding downstream 42213 17689118 ~ 17691283 (+)
G136564 NA non-coding upstream 9680 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 156097 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 156814 17488350 ~ 17488827 (+)
G136490 NA non-coding upstream 182956 17419215 ~ 17462685 (+)
G136486 NA non-coding upstream 243281 17402019 ~ 17402360 (+)
G136568 NA non-coding downstream 1723 17648628 ~ 17649107 (+)
G136571 NA non-coding downstream 16528 17663433 ~ 17664170 (+)
G136718 NA non-coding downstream 254003 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 614992 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 648310 18295215 ~ 18317076 (+)
G136558 NA other upstream 97673 17547368 ~ 17547968 (+)
AMCG00012401 adar other upstream 122820 17509372 ~ 17522821 (+)
G136489 NA other upstream 169544 17411761 ~ 17476097 (+)
G136499 NA other upstream 179582 17459484 ~ 17466059 (+)
AMCG00012387 NA other upstream 256842 17384936 ~ 17388799 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other downstream 2360 17649265 ~ 17653462 (+)
AMCG00012417 NA other downstream 108515 17755420 ~ 17760282 (+)
G136641 NA other downstream 117240 17764145 ~ 17767531 (+)
AMCG00012423 LOC102799202,LOC107564869 other downstream 145346 17792251 ~ 17795244 (+)
G136658 NA other downstream 194028 17840933 ~ 17843921 (+)

Expression


Co-expression Network