Gene
RNA
| Item | Value |
|---|---|
| gene id | G136568 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17648628 ~ 17649107 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU171663 | True | 480 | lncRNA | 0.48 | 1 | 17648628 | 17649107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012407 | rit1,LOC107672884 | coding | upstream | 27441 | 17614494 ~ 17621187 (+) |
| AMCG00012404 | syt11 | coding | upstream | 38725 | 17605733 ~ 17609903 (+) |
| AMCG00012406 | ints3,LOC106588323 | coding | upstream | 50556 | 17581376 ~ 17598072 (+) |
| AMCG00012397 | NA | coding | upstream | 69857 | 17552586 ~ 17578771 (+) |
| AMCG00012396 | ilf2,LOC106588321,LOC106569884 | coding | upstream | 110999 | 17529773 ~ 17537629 (+) |
| AMCG00012405 | NA | coding | downstream | 8351 | 17657458 ~ 17662757 (+) |
| AMCG00012403 | NA | coding | downstream | 18236 | 17667343 ~ 17676356 (+) |
| AMCG00012402 | NA | coding | downstream | 27558 | 17676665 ~ 17679965 (+) |
| AMCG00012410 | NA | coding | downstream | 34287 | 17683394 ~ 17688471 (+) |
| AMCG00012413 | ssr2,LOC106570196,LOC106588555,LOC107748705 | coding | downstream | 40011 | 17689118 ~ 17691283 (+) |
| G136564 | NA | non-coding | upstream | 12667 | 17623113 ~ 17635961 (+) |
| G136539 | NA | non-coding | upstream | 159084 | 17489319 ~ 17489544 (+) |
| G136538 | NA | non-coding | upstream | 159801 | 17488350 ~ 17488827 (+) |
| G136490 | NA | non-coding | upstream | 185943 | 17419215 ~ 17462685 (+) |
| G136486 | NA | non-coding | upstream | 246268 | 17402019 ~ 17402360 (+) |
| G136571 | NA | non-coding | downstream | 14326 | 17663433 ~ 17664170 (+) |
| G136718 | NA | non-coding | downstream | 251801 | 17900908 ~ 17901656 (+) |
| G136842 | NA | non-coding | downstream | 612790 | 18261897 ~ 18269507 (+) |
| G136848 | NA | non-coding | downstream | 646108 | 18295215 ~ 18317076 (+) |
| G136866 | NA | non-coding | downstream | 784463 | 18433570 ~ 18470784 (+) |
| G136566 | NA | other | upstream | 1723 | 17645641 ~ 17646905 (+) |
| G136558 | NA | other | upstream | 100660 | 17547368 ~ 17547968 (+) |
| AMCG00012401 | adar | other | upstream | 125807 | 17509372 ~ 17522821 (+) |
| G136489 | NA | other | upstream | 172531 | 17411761 ~ 17476097 (+) |
| G136499 | NA | other | upstream | 182569 | 17459484 ~ 17466059 (+) |
| G136569 | cks1b,LOC103032043,LOC108433716,LOC103358762 | other | downstream | 158 | 17649265 ~ 17653462 (+) |
| AMCG00012417 | NA | other | downstream | 106313 | 17755420 ~ 17760282 (+) |
| G136641 | NA | other | downstream | 115038 | 17764145 ~ 17767531 (+) |
| AMCG00012423 | LOC102799202,LOC107564869 | other | downstream | 143144 | 17792251 ~ 17795244 (+) |
| G136658 | NA | other | downstream | 191826 | 17840933 ~ 17843921 (+) |
