G136589


Basic Information

Item Value
gene id G136589
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17578454 ~ 17579296 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171695
NNNCAGTGGTGTGAGTAGGGAAACATGACTctagaatacacacacacacacaacgaaCGACAACGAAAAAAGATAATACAAAAGAACAGGAGTCCCGGCACAGTGCGGTGACAGTGGGGACATCGCGCCCAGCCCCACGAGGCCTCTCCCTCCACAAAATCCCCCACGTCCTGTGCCAGCGTCCCCCGTCTCTCCCCTGCACCGTCCCATTCACACGCAGTGTCATTGTGTGTCCGCCAGAGGGAGCTGCCTGCCTCCACCCCCGCACGTGCGGCGCTGTGCAGGAGTGTGTGGGCGTGTGAGAGcatgtgcgtgtcagtgtgcgCGATtatgtgcgagtgtgtgtgacgttgtgtgtgcctgtctgtgcAGCTGTGCGTcgagtgtgtgattgtgtgtgggGAGTGTTGCGAGTGGGCGCTGTTTTTCGCATcacccctctcctcctctcctccccatcttctcttcatctctctgccttcctcttccctccttccctctctctctttctctctctctctctcctcacactGCGGCGCTGCTCTCCCCCAGCAGCCAGTACGTGGTCATCTTCCCTTTGCCCTTCATCTCCACCTCTCCGCGCAGCTCCAGCTCGAACCCGCTGAGCTCCTGTAGCACCACGTGGGTCGCCGCCGACACGTGGATCTTCAGCGCTGCAGCAGAGCACAGGGCACAGggcacaggacacaggacacaggacacaggacacaggacacacgacacaGGACACACGACACAGGGCACAGGGCACAGGACACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171695 True 780 lncRNA 0.59 2 17578454 17579296

Neighbor

gene id symbol gene type direction distance location
AMCG00012400 NA coding downstream 50920 17526875 ~ 17527534 (-)
AMCG00012398 NA coding downstream 55375 17519655 ~ 17523079 (-)
AMCG00012399 adar coding downstream 67362 17507924 ~ 17511092 (-)
AMCG00012394 NA coding downstream 113118 17459923 ~ 17465336 (-)
AMCG00012390 NA coding downstream 214005 17344354 ~ 17364449 (-)
AMCG00012409 NA coding upstream 55561 17634857 ~ 17635861 (-)
AMCG00012408 NA coding upstream 67876 17647172 ~ 17649026 (-)
AMCG00012415 NA coding upstream 112445 17691741 ~ 17697285 (-)
AMCG00012419 psmd4,LOC102080581,LOC102799202,LOC101479706,LOC103358749 coding upstream 203191 17782487 ~ 17795215 (-)
AMCG00012421 NA coding upstream 249711 17829007 ~ 17842851 (-)
G136581 NA non-coding downstream 30481 17547366 ~ 17547973 (-)
G136574 NA non-coding downstream 64165 17513580 ~ 17514289 (-)
G136545 NA non-coding downstream 73077 17504183 ~ 17505377 (-)
G136536 NA non-coding downstream 108678 17467889 ~ 17469776 (-)
G136525 NA non-coding downstream 130356 17447530 ~ 17448098 (-)
G136602 syt11a,LOC105906331,LOC107745033,LOC103033225 non-coding upstream 30196 17609492 ~ 17609910 (-)
G136578 NA non-coding upstream 40843 17620139 ~ 17621187 (-)
G136605 NA non-coding upstream 49591 17628887 ~ 17630828 (-)
G136607 NA non-coding upstream 64215 17643511 ~ 17643758 (-)
G136616 NA non-coding upstream 84159 17663455 ~ 17664170 (-)
G136544 NA other downstream 74468 17503618 ~ 17503986 (-)
AMCG00012392 NA other downstream 95095 17474648 ~ 17483359 (-)
AMCG00012393 NA other downstream 144341 17416574 ~ 17434113 (-)
AMCG00012391 NA other downstream 196859 17380180 ~ 17381595 (-)
G136408 NA other downstream 335627 17233928 ~ 17242827 (-)
G136625 NA other upstream 107036 17686332 ~ 17688512 (-)
G136666 NA other upstream 141430 17720726 ~ 17724068 (-)
AMCG00012416 NA other upstream 178038 17757334 ~ 17764561 (-)
AMCG00012414 NA other upstream 188114 17767410 ~ 17779122 (-)
AMCG00012437 LOC106580258 other upstream 518881 18098177 ~ 18102329 (-)

Expression


Co-expression Network