G136718


Basic Information

Item Value
gene id G136718
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17900908 ~ 17901656 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171869
ttaaaacacacagacgaATGAGCATCACTAGAGCTGGAGTTTTATTTCTATCAGATGTCAGTGAAAcagagcagaaaaacaaaaacaaaaaacacataaataactGGACTTCTGATCAATTTCAATCCAAGTTTCTGACGGAAAGGCAGATGACAATTACGAAGGGGCTGAGAAGACTGACCTccccataaaaataaatcttgaatTGCCAGAGTGAGGGGAAACATTTCAATTGGGGACAATGAGACAGGGACGTGGCGTTCGATTACCCCCGGGACCGCCTTCACGGTTCCAGAACTTTGAGAACATTCTTTAACCCCAAACTAAACAACACACTGGAGCGCAGACAAaccattatttcattttttatttacttaattcgATGTTTTTAAGGATTAGTTTCTTCCGGCTCCCGCTGTGACGGAACAGGAATGTGCTGCATAACGGGCCCCTGGGACGAATGCCGTGTTACTCCCACCCAGAGACGAGCAGGAGTCAGACCTTCTGGCAGCCTTCTGGGAGCTGAGCTGCTCAGAGAGCCCCCCCATAGTGAGACAATGGTCAAGTGCTTTGCCGTTCTCTGCGCCTCTCCCagtcttcctCTGGCATGGCTGCTCCTGCGCCGGAGTCGTCGCTCTTCTTCTTGTGTCCCGAGACGATGTCATCGATGCGCAGCAGCAGGATGGCGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171869 True 692 lncRNA 0.48 2 17900908 17901656

Neighbor

gene id symbol gene type direction distance location
AMCG00012418 NA coding upstream 86344 17806559 ~ 17814564 (+)
AMCG00012411 NA coding upstream 149453 17730997 ~ 17751455 (+)
AMCG00012412 NA coding upstream 187598 17700146 ~ 17713310 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding upstream 209625 17689118 ~ 17691283 (+)
AMCG00012410 NA coding upstream 212437 17683394 ~ 17688471 (+)
AMCG00012428 NA coding downstream 36281 17937937 ~ 17941562 (+)
AMCG00012429 NA coding downstream 100983 18002639 ~ 18006774 (+)
AMCG00012432 NA coding downstream 260920 18162576 ~ 18169744 (+)
AMCG00012431 NA coding downstream 272354 18174010 ~ 18179817 (+)
AMCG00012440 anp32e,LOC100707939,LOC102193634,LOC102789185 coding downstream 328089 18229745 ~ 18237188 (+)
G136571 NA non-coding upstream 236738 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 251801 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 264947 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 411364 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 412081 17488350 ~ 17488827 (+)
G136842 NA non-coding downstream 360241 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 393559 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 531914 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 571577 18473233 ~ 18474916 (+)
G136969 NA non-coding downstream 714242 18615898 ~ 18653598 (+)
G136658 NA other upstream 56987 17840933 ~ 17843921 (+)
AMCG00012423 LOC102799202,LOC107564869 other upstream 105664 17792251 ~ 17795244 (+)
G136641 NA other upstream 133377 17764145 ~ 17767531 (+)
AMCG00012417 NA other upstream 140626 17755420 ~ 17760282 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other upstream 247446 17649265 ~ 17653462 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other downstream 1176 17902832 ~ 17903810 (+)
AMCG00012439 NA other downstream 228628 18130284 ~ 18134381 (+)
G136864 psmb4 other downstream 483633 18385289 ~ 18388306 (+)
AMCG00012460 NA other downstream 637889 18539545 ~ 18544490 (+)
AMCG00012471 NA other downstream 1145841 19047497 ~ 19053829 (+)

Expression


Co-expression Network