G136826


Basic Information

Item Value
gene id G136826
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18140751 ~ 18179687 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172012
TCTCTCTCCTCCCACTACCCTCAGATATATACTCCGACAGTTACACACTGTAGGGAAAATCTGTGAGATTGATCCATGCAGAATTTATTTGTTCACTTCCCGGTGACCGGCAGCTCATATCAACAAATGCTTCACATCTCTCATAAAAATACGTTATTTACAGTATACTATTAACAGAGTCATTGgggatggggaaaaaaacacttagCGTTCAAAACTGCTCAGATCAACAGTGATTTAACCGAACAGCTGGCAGTCTAAGGTTTTAAAGACTTCTGCCTCCAAATGGAAgatttgacattaaaaaatgtcaattgtgattaaaaaacaaaaaaacacaatcttaGTTTGGtgcaaaatattacaatgcGGTGACTTAAATACTAGAAAACCTGGGTTTGTTTTTCCCACCAATAACTCAAAGGATCTGTTCTGAAACCATACGTTGGacaatgtgcaaaaaataaaataaaacatctggacaaatgagagcgagagggaggaatattaataataaaaaaaaattgcaccaACTGtacaagttaaaataaacaaatattaatgaaaatcaataataatattgggGATAAATAGCAGGATAAAGACGTCTAAGCAATTTTCTGGGATGTCCTGACTGCATATTACAACCATGTGCAAGTgtattcatcattattatttagagAAATACCCTAAGTATACATTATTTCCAAAGTAGTGACTAAATCCTGCATTTGTAGACcattattttcccatttcctcatttgttttgatgagaaacaacacaaaacagattgAACAAATCCCAATAAATACAGTCCCGACAGAATATAGTccgtcccccccaccccaacactTTTTAAGAGATGAGAGGCAAAATACAGATGAAGGCAAAGACCGAAAGTCTTTAAACTGGGAAAGTCATTAAAGCCCCTCTGACCCTGGCACCCTCTCCACGGCGTCGACCGACCCAGGCGATGGCCGGTTGCACAGTAACTGAAAGAAACGGGGTCCGAGGGTGCCGTCCCACAGTAAataaccccccacacacactcagcacACCCACTCGGAGAATGGGAGGGAGACTCAGACATGACGGCCTTCGTTCAAACGTAAATACAAACTGacacaaatacaacataaacaCAGCTGTGGAGGCGCGTCAGTGTCCTGTAGGAGCTCAGAACTCCCCTGTGGAGCGTGTAccatggaggggggggggaaggtgTGCTTTAAGAATTGGCTCAGATCAGAGGAGAAATCACactgaatcacacacacacacacacacacacacacacacacacacacacacacacacactctctctgtctctctctcgcaaATGTCTCTTCTTgcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172012 True 1358 lncRNA 0.41 2 18140751 18179687

Neighbor

gene id symbol gene type direction distance location
AMCG00012435 NA coding downstream 10177 18117972 ~ 18130574 (-)
AMCG00012436 NA coding downstream 50503 18073391 ~ 18090248 (-)
AMCG00012430 NA coding downstream 87730 18036680 ~ 18053021 (-)
AMCG00012426 NA coding downstream 159987 17964421 ~ 17980764 (-)
AMCG00012424 NA coding downstream 211480 17919131 ~ 17929271 (-)
AMCG00012442 NA coding upstream 767 18180454 ~ 18182515 (-)
AMCG00012445 NA coding upstream 6036 18185723 ~ 18186795 (-)
AMCG00012444 NA coding upstream 15378 18195065 ~ 18207483 (-)
AMCG00012443 NA coding upstream 61236 18240923 ~ 18251006 (-)
AMCG00012441 NA coding upstream 82178 18261865 ~ 18277604 (-)
G136820 NA non-coding downstream 27848 18112676 ~ 18112903 (-)
G136746 NA non-coding downstream 168898 17912238 ~ 17971853 (-)
G136750 NA non-coding downstream 177507 17941472 ~ 17963244 (-)
G136623 NA non-coding downstream 456568 17682207 ~ 17684183 (-)
G136616 NA non-coding downstream 476581 17663455 ~ 17664170 (-)
G136915 NA non-coding upstream 240322 18420009 ~ 18493905 (-)
G136906 NA non-coding upstream 259892 18439579 ~ 18442587 (-)
G136951 NA non-coding upstream 365231 18544918 ~ 18546313 (-)
G136955 NA non-coding upstream 373320 18553007 ~ 18556113 (-)
G136968 NA non-coding upstream 434352 18614039 ~ 18614257 (-)
AMCG00012437 LOC106580258 other downstream 38422 18098177 ~ 18102329 (-)
AMCG00012414 NA other downstream 361629 17767410 ~ 17779122 (-)
AMCG00012416 NA other downstream 376190 17757334 ~ 17764561 (-)
G136666 NA other downstream 416683 17720726 ~ 17724068 (-)
G136625 NA other downstream 452239 17686332 ~ 17688512 (-)
G136837 NA other upstream 25688 18205375 ~ 18237256 (-)
G136900 NA other upstream 195643 18375330 ~ 18378297 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other upstream 337149 18516836 ~ 18537125 (-)
AMCG00012467 NA other upstream 747692 18927379 ~ 18933201 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other upstream 852916 19032603 ~ 19043449 (-)

Expression


Co-expression Network