Gene
RNA
| Item | Value |
|---|---|
| gene id | G136915 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 18420009 ~ 18493905 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060841 | venous blood vessel development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU172125 | True | 338 | lncRNA | 0.52 | 2 | 18420009 | 18493905 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012450 | psmb4 | coding | downstream | 31780 | 18383678 ~ 18388229 (-) |
| AMCG00012449 | NA | coding | downstream | 93126 | 18323005 ~ 18326883 (-) |
| AMCG00012448 | vps45,LOC106588336 | coding | downstream | 99036 | 18295215 ~ 18320973 (-) |
| AMCG00012441 | NA | coding | downstream | 142405 | 18261865 ~ 18277604 (-) |
| AMCG00012443 | NA | coding | downstream | 169003 | 18240923 ~ 18251006 (-) |
| AMCG00012461 | NA | coding | upstream | 74944 | 18568849 ~ 18569085 (-) |
| AMCG00012463 | NA | coding | upstream | 101296 | 18595201 ~ 18601943 (-) |
| AMCG00012462 | NA | coding | upstream | 122008 | 18615913 ~ 18651892 (-) |
| AMCG00012469 | NA | coding | upstream | 446067 | 18939972 ~ 18954308 (-) |
| AMCG00012468 | NA | coding | upstream | 465911 | 18959816 ~ 18967559 (-) |
| G136826 | NA | non-coding | downstream | 240322 | 18140751 ~ 18179687 (-) |
| G136820 | NA | non-coding | downstream | 307106 | 18112676 ~ 18112903 (-) |
| G136746 | NA | non-coding | downstream | 448156 | 17912238 ~ 17971853 (-) |
| G136750 | NA | non-coding | downstream | 456765 | 17941472 ~ 17963244 (-) |
| G136623 | NA | non-coding | downstream | 735826 | 17682207 ~ 17684183 (-) |
| G136951 | NA | non-coding | upstream | 51013 | 18544918 ~ 18546313 (-) |
| G136955 | NA | non-coding | upstream | 59102 | 18553007 ~ 18556113 (-) |
| G136968 | NA | non-coding | upstream | 120134 | 18614039 ~ 18614257 (-) |
| G136997 | NA | non-coding | upstream | 293051 | 18786956 ~ 18787155 (-) |
| G137008 | NA | non-coding | upstream | 408568 | 18902473 ~ 18902838 (-) |
| G136900 | NA | other | downstream | 41712 | 18375330 ~ 18378297 (-) |
| G136837 | NA | other | downstream | 182753 | 18205375 ~ 18237256 (-) |
| AMCG00012437 | LOC106580258 | other | downstream | 317680 | 18098177 ~ 18102329 (-) |
| AMCG00012414 | NA | other | downstream | 640887 | 17767410 ~ 17779122 (-) |
| AMCG00012416 | NA | other | downstream | 655448 | 17757334 ~ 17764561 (-) |
| AMCG00012459 | cdc42se1,LOC106569912,LOC106588345,LOC102790437 | other | upstream | 22931 | 18516836 ~ 18537125 (-) |
| AMCG00012467 | NA | other | upstream | 433474 | 18927379 ~ 18933201 (-) |
| AMCG00012472 | ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 | other | upstream | 538698 | 19032603 ~ 19043449 (-) |
| G137199 | NA | other | upstream | 948022 | 19441927 ~ 19507394 (-) |
| G137246 | NA | other | upstream | 1220257 | 19714162 ~ 19793531 (-) |
