G137079


Basic Information

Item Value
gene id G137079
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19125841 ~ 19126313 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172316
cctgacccgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggtgctttcggcagtggacaggggtcagcatgggcagcctgactggtctgcgctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcatgaactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacaggccagccttcgctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172316 True 473 lncRNA 0.54 1 19125841 19126313

Neighbor

gene id symbol gene type direction distance location
AMCG00012474 onecut1,LOC107746960 coding upstream 16338 19100319 ~ 19109503 (+)
AMCG00012470 NA coding upstream 59928 19054640 ~ 19065913 (+)
AMCG00012465 LOC107732464 coding upstream 188363 18933584 ~ 18937478 (+)
AMCG00012464 tnfaip8l2,LOC106605333,LOC105031250,LOC106580940,LOC107587822 coding upstream 200792 18915218 ~ 18925049 (+)
AMCG00012466 LOC107741773,LOC108262134,LOC106580947,LOC108441933,LOC106605334 coding upstream 217107 18896414 ~ 18908734 (+)
AMCG00012476 NA coding downstream 144997 19271310 ~ 19273160 (+)
AMCG00012479 NA coding downstream 151403 19277716 ~ 19294096 (+)
AMCG00012481 NA coding downstream 174500 19300813 ~ 19333427 (+)
AMCG00012483 NA coding downstream 334978 19461291 ~ 19467495 (+)
AMCG00012484 NA coding downstream 350069 19476382 ~ 19483546 (+)
G137074 NA non-coding upstream 10979 19112770 ~ 19114862 (+)
G137027 NA non-coding upstream 99836 19020158 ~ 19026005 (+)
G137031 NA non-coding upstream 153775 18964534 ~ 18972066 (+)
G137016 NA non-coding upstream 192593 18932424 ~ 18933248 (+)
G137007 NA non-coding upstream 222970 18902512 ~ 18902871 (+)
G137080 NA non-coding downstream 12812 19139125 ~ 19161143 (+)
G137110 NA non-coding downstream 108097 19234410 ~ 19236788 (+)
G137130 NA non-coding downstream 195693 19322006 ~ 19322259 (+)
G137144 NA non-coding downstream 235031 19361344 ~ 19395753 (+)
G137155 NA non-coding downstream 297240 19423553 ~ 19425538 (+)
AMCG00012471 NA other upstream 72012 19047497 ~ 19053829 (+)
AMCG00012460 NA other upstream 581351 18539545 ~ 18544490 (+)
G136864 psmb4 other upstream 737535 18385289 ~ 18388306 (+)
AMCG00012439 NA other upstream 991460 18130284 ~ 18134381 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other upstream 1222031 17902832 ~ 17903810 (+)
G137083 NA other downstream 43435 19169748 ~ 19174421 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other downstream 111376 19237689 ~ 19238958 (+)
AMCG00012480 NA other downstream 206015 19332328 ~ 19350202 (+)
G137252 NA other downstream 688612 19814925 ~ 19815617 (+)
G137265 txnip,LOC106943536,LOC106570200,LOC105012721 other downstream 764854 19891167 ~ 19895599 (+)

Expression


Co-expression Network