G137094


Basic Information

Item Value
gene id G137094
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19179139 ~ 19181358 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172337
TTTAATTTGAGTATTTATTGTTAAATTGATAATGTGTGATACAAATACAGCATTACTTTACCTGTACCAACTTAAACTCCCCAAAaacatatatcatatatcatttACAAATTCACTTGGACgaaagcagtgtttttaaacatttatttatcactttTGACATCTCACTTTTGGGGCTTCAGAACATTTAAATGGtgtattgaaacatttttttttaatagtatagCAGAAGTATCATATTCTGTTTGCTTGTCTATATTTTATTAGTCAAGTTCCTATATGGGTTTTGCACATAAGTCATAACACCTGGCATCTgcatatgattatatatattttttttaactggtccTAAGTCTAGGTTTAAATCAAAGGGAGATCGTGCTTTTCCTGTAAATGCCCCTAGACTTTGGAACAGCTTACCTTTTAACATTAGAGTCGGtccatgttttttaaatctcaaaactcaTTTTATACACTTGCATTTCCATATGTATGAAACAGTTATTAactattttaagttttattgcaagttttttttttttttatatattcccCCGAAAATACGAACTTCTGGgttaaaaaaaacctgtcacaatatatatgctTCAAACTGCCACCAAATAAGCAAGTTAAACTAAAATGCGAAGTGAAATAGTCAGATCACAACTGGAGACACCGAATCCAGTTCCAGGGAAGTTCTGTTGTACAGCCAGTTAATTAATGATCTAATTTCATTAATTATCCATCAACCAGACAGTGATGACCTGAAATGACCTGATCTGTAATTGGCTGACACAGTAGAGGAAGGCACACCCACATTTAGCAGGTCAGTTTAAAAGCTTCAACAAACCAACTGCAATATAACTTTCATTCTGTGAAGACATGAAGGAGGAAAAACATGAagtgacacaaacacaggacCCAGCAGAGCACACGACTCTCATGAGACACCCAGCCAATCCAGGAGGGGCCCATCACATGATGTCTATATAACCAGACGCCACCTGCAGTGCTGAGCCCTCTGACTGTAACTGCACCTCTCCCTCTGCGGACACTTCATAGGGGCTCCATACTATCAGTACAGCAGTGAGGACACCTGACAGGACAGCACAGCAGGCCTGACACAATAGGGCCAAAGACCATTATAACACAATAGTCATGAGCTCATAATACAATAGGGGCCTATagtaaaagtgcagtaatacagtcCTGTTCTAATAGAGGGGGCAGcagtaacagtgcagtacaaggcaaGAGGTAAAACCATGGAATTTTactcaatttaaattataaagttaaaaataagattaattatgtaattgttttgagCACAACAATCCACAGATTCAGAACTCAGTTCACAGTGAAGCAGATTCAATTCCAGCCTTTCCATGATGCTCAAGCACTTCACTACAGGTTTAATATTTCTATAGAGGATCGTAGAGACGGTCTCTGATCTATAAAATGGAGAGAGTGAGGATCCCATCACTGCACAGCCCAGTCAGTCCTGTTCAGAAGGAGGCAGCTGTGGGACGAGTAGAAACCCCTCTGGGGCTGGAGAGCACTGATCTGAATCTCACTGTTATTACTCTCACTGgtgtagtgtaaggtacacatacatttcacttaaagaagtgaattttagtatcaccttatcaagaatcctagaatcttgtagaactcaatttctgcaataattggatgcagacaccaattccaaagatataaattctcaaatgtattataaacaaagataaaatgtagcactacactagttatacaaaaagggaaaaacttattaaaattcactcaagatcaacaaatcaaagacaaatcacttccgtgaccaaatcaaagaccatggaatcacatatgataacacacaaaaggTTACAcgaaattacaaacacattgactacaataccggttagtaagacaaaggtgagtctctcattagtattgttagtcggacattaaataactaatgcaaattagtatttaagtcaaataacttctcgttatacaTATCagtttcgcgaaagtagagtcgtttccaaacagattttccactggtttgaaggctccaaggttgtgcacaaaatcttctttgcaagcagggtttttccaccgtagttattgaagacaaagtctttgaggaaagtaggaccctgttcgtttccaagggtcaagtttcttaagactcaaatagctatttaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172337 True 2220 lncRNA 0.37 1 19179139 19181358

Neighbor

gene id symbol gene type direction distance location
AMCG00012475 NA coding downstream 59131 19116298 ~ 19120008 (-)
AMCG00012473 NA coding downstream 153044 19019495 ~ 19026095 (-)
AMCG00012468 NA coding downstream 211580 18959816 ~ 18967559 (-)
AMCG00012469 NA coding downstream 224831 18939972 ~ 18954308 (-)
AMCG00012462 NA coding downstream 527247 18615913 ~ 18651892 (-)
AMCG00012478 NA coding upstream 15239 19196597 ~ 19204742 (-)
AMCG00012477 NA coding upstream 25991 19207349 ~ 19251412 (-)
AMCG00012482 NA coding upstream 119137 19300495 ~ 19323213 (-)
AMCG00012485 NA coding upstream 234589 19415947 ~ 19417276 (-)
AMCG00012490 LOC107577543,LOC107716568 coding upstream 328879 19510237 ~ 19517748 (-)
G137014 NA non-coding downstream 252796 18925545 ~ 18926343 (-)
G137008 NA non-coding downstream 276301 18902473 ~ 18902838 (-)
G136997 NA non-coding downstream 391984 18786956 ~ 18787155 (-)
G136968 NA non-coding downstream 564882 18614039 ~ 18614257 (-)
G136955 NA non-coding downstream 623026 18553007 ~ 18556113 (-)
G137214 NA non-coding upstream 323526 19504884 ~ 19635067 (-)
G137232 NA non-coding upstream 436169 19617527 ~ 19622445 (-)
G137248 NA non-coding upstream 586770 19768128 ~ 19774086 (-)
G137270 NA non-coding upstream 718848 19900206 ~ 19900440 (-)
G137384 NA non-coding upstream 985717 20167075 ~ 20227959 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 135690 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 245938 18927379 ~ 18933201 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other downstream 642014 18516836 ~ 18537125 (-)
G136900 NA other downstream 800842 18375330 ~ 18378297 (-)
G136837 NA other downstream 941883 18205375 ~ 18237256 (-)
G137199 NA other upstream 260569 19441927 ~ 19507394 (-)
G137246 NA other upstream 532804 19714162 ~ 19793531 (-)
AMCG00012503 NA other upstream 721748 19903106 ~ 19910378 (-)
G137408 NA other upstream 1079644 20261002 ~ 20270864 (-)
G137608 NA other upstream 1853805 21035163 ~ 21038431 (-)

Expression


Co-expression Network