G137144


Basic Information

Item Value
gene id G137144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19361344 ~ 19395753 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172414
caagaagaagcacattaaggtcctggagtggcctaacCAGTCTCCAGACCCTAATCCCAatgaaaatctgtggagggagctgagggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggccaaacaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172414 True 270 lncRNA 0.50 2 19361344 19395753

Neighbor

gene id symbol gene type direction distance location
AMCG00012481 NA coding upstream 27917 19300813 ~ 19333427 (+)
AMCG00012479 NA coding upstream 67248 19277716 ~ 19294096 (+)
AMCG00012476 NA coding upstream 88184 19271310 ~ 19273160 (+)
AMCG00012474 onecut1,LOC107746960 coding upstream 251841 19100319 ~ 19109503 (+)
AMCG00012470 NA coding upstream 295431 19054640 ~ 19065913 (+)
AMCG00012483 NA coding downstream 65538 19461291 ~ 19467495 (+)
AMCG00012484 NA coding downstream 80629 19476382 ~ 19483546 (+)
AMCG00012489 s100a1,LOC108441918,LOC108272706,LOC107587912,LOC105028680,LOC107689908,LOC107598020,LOC107663298 coding downstream 100694 19496447 ~ 19501256 (+)
AMCG00012487 hdgf coding downstream 123353 19519106 ~ 19523682 (+)
AMCG00012488 NA coding downstream 132719 19528472 ~ 19531808 (+)
G137130 NA non-coding upstream 39085 19322006 ~ 19322259 (+)
G137110 NA non-coding upstream 124556 19234410 ~ 19236788 (+)
G137080 NA non-coding upstream 200201 19139125 ~ 19161143 (+)
G137079 NA non-coding upstream 235031 19125841 ~ 19126313 (+)
G137074 NA non-coding upstream 246482 19112770 ~ 19114862 (+)
G137155 NA non-coding downstream 27800 19423553 ~ 19425538 (+)
G137177 NA non-coding downstream 109130 19504883 ~ 19509198 (+)
G137196 NA non-coding downstream 263993 19659746 ~ 19689785 (+)
G137242 NA non-coding downstream 393234 19788987 ~ 19793532 (+)
G137332 NA non-coding downstream 769530 20165283 ~ 20228036 (+)
AMCG00012480 NA other upstream 11142 19332328 ~ 19350202 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other upstream 122386 19237689 ~ 19238958 (+)
G137083 NA other upstream 186923 19169748 ~ 19174421 (+)
AMCG00012471 NA other upstream 307515 19047497 ~ 19053829 (+)
AMCG00012460 NA other upstream 816854 18539545 ~ 18544490 (+)
G137252 NA other downstream 419172 19814925 ~ 19815617 (+)
G137265 txnip,LOC106943536,LOC106570200,LOC105012721 other downstream 495414 19891167 ~ 19895599 (+)
AMCG00012512 NA other downstream 850898 20246651 ~ 20270919 (+)
AMCG00012516 NA other downstream 935328 20331081 ~ 20344646 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other downstream 1005256 20401009 ~ 20422556 (+)

Expression


Co-expression Network