G137265 (txnip,LOC106943536,LOC106570200,LOC105012721)


Basic Information

Item Value
gene id G137265
gene name txnip,LOC106943536,LOC106570200,LOC105012721
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19891167 ~ 19895599 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172571
aacgaacccATAGGATtccatatacaaatacaaacaatactttttgcaattcgaagatataaaaaaaaatatatatgtacactttTACAAAAGTCAAACAATAGAACATTGTAGCTTGAAGAAATAGTAAATTGTTCTTGTTGAAGAACCCCACAAATGAAATGCTGTTCAGGAGTAGCCCTTGAAAGTTCtattaatcacaaaataaaaataaggtgCAATTCCTGATGTTAGAACCAATGTCAGGGGTTTGAGCCCAAGAACAGGGCTGCATTTGGCACTGGTAGTGTCAGAAAAGTTGACGTGACTAAACTCACGATCCAAAAGTcgagcagatttaaaaaaataattcgGTAGCAATTAACTAGGTTTGATCTGAATGCAGTTGGAGTTCTTGTGCTCAAAATCGGGGACAACCTCTAACAAGCGGAAAGACTCAACCCATGGTTGTATGAAGATCACAGGTAATCCGgaagacaatttaaaaaaaactttcctgTAGGCAGTTATAGAGCAAGTTTGCATCCATAGAAAGTGCAATATCACAGTTGAAAAACACTGATGTACAGCAAGTTTCAATACAATCAAGTCTGCATGTTACAATCCTCAGAAGAAATGCATAGCAAAGACCAGACAGACATGCAGAAGATCTCAAATACAAATCACGGATAATAGTAGTCATTTTTCTTTACTCTTCTGCAAGAACAGGGTGTTGCACACTCCTTCTTTGAGGAGAGAAATATAAAAGTGGTTCCTTTACTGAAAGTCCCACCCCACTGACATCAGGTATTTGGGAATGACTAAGACTGCAAACCGGACGGATCCAGAAAGTAGTGTGTGTGGGGTTTCAGGGTGACCCAAATTAAGCCGAAAGCTTTTGGGGGCTTGCAAAGGCCGCAAGCCTGTAGGAGTGTTCTAGTCAACTGCCCCTATTAAGATGGCTATGTTGCGAGTTATCCAACTTACAAAGTCTTTAAAACACAAGGTCGGACAGAACAGGCCGACACCAGGACAGTACCCCAGTGGGTGTGGTGCGCGACGACTCTTTGGAGGGCTGGAACTTTGAAGAGCACCAAGAAAAAACGCATAGGCCTATATAAATCTATAGGACGTTCAGCTCAAGTCTGCATGGAGAGACAAAGACTGACAAGTGTAGGCACTAAGCTTGCAGGGGCTGGTTTTCACCCTCTTTCCCGGCCTGGAACGCCACCTTTCTCATCTGATCCATCGATCCAGGCCGGCCTCGCAGAGAAGCCCTCGTCCTCAGTCGAGATTTCCAAACCATCTCTTCCTCCTCGTTGGCGGTCCCCCTTTTTTTACCATTCAAATgcggaagaaaaataaaacgctAGGCGAGAGTCACTGAGGAATCTGCGGCATGTCTCTCTAGCACGGGGGGCTGACGGCCATCATGTTGCCGTTAAACTGCTGGTTCAcctgagaggaagaggagagaggggtgggggttagTTTAAAGACCAAGCAGACAGCTTTCCAAAGAACAAGTGTTGAAGATATaattttatgcttttaaaagagCCTGGGAACAGGCCCTTACCTCGGAGTACGCAGGAGGAGGCGGGAACTCGAACTGGGGGACGTTCATGAAGAGGGGGCTGTCGCCGCCGTCATAGTCGTCCAGCAGCGGGGTGAGGGGTGTGTCCAGGCGGCAGTCACGGGCGATGTCGCAGTAGCTGGGGGGCGCTGAGGGCATGCGCAGGGACACCCAGCTGTTGGAGCTCGTGCTGCCGTCCTGGCTGGTCATGCTGTTGGTGCGGCTGCTAAGGCCATTGTAGGGGACAGTGCCGATCACGAGGGGCAGCTCCATCACCAGTTTGTCGCTGCCGGGGATGTGGACGTAGATCTGcgggagagaggaggagcaggagattAGAAAACGCTCTTCACGACCGAAGCAGGAACGGTTCTCGGGCTGCGGGCATCCAGGACACGAAGCGGAGGCGGGGACTCACCATGAGGGCGTACTCCACACGGATGATGTTGCAGCCCAGGATGGAGGGCTTGATCTTGGGCACCCGGATGCTCTTGCCCTGCCAGGCGTCGCACATGCCCGAGATGATGTGGTTGCCACGGACGGACGACAGCTTCTGCTGGAAGACTTTGGTGCGCCCGTTGGCCTGGTAGGTGTGCTTGGCCACGATGGCTGCCTTGGGTACCACGATGCGGGAACAGGTGTTCTCGAACTTGGCGTCGATGCAGATATCCTCGCcttCAGAAGCCCTTGCGGTCAATCTTGGCGTTCAGGGACACTTGCCCGTCAGGAATGAACATGCAGGTCACTTTCTTCTCTTTGGTCCCAGCAGCTGGAGACCATGAGGTCAGGGGTGTTGACATCCAAGGGCTCAACCACATCGAAGTTCTTCTTCACTTCCAGGGCCGGCTGGGAGGGTCTCTCCAGCAGGGCCTTAACGTAGTACTCCACGCTGCCAAACTTGCCCTTGTAGGACGTTACCATCTGCCTGCGAGGACAAGAGCAGGGACACTCGGTTAGCACCACacattaaaaaccaaaacattaaaacaggtCCATCTGTTCAGAAGGGCTTCGGCTCAGATATGTGGGAAACACTTACCCTGGCTGAGGCAGCTCGAACCCAAACATGTACTCGTACTTGTTGCCTGGTCTGAGCGTCACCGAGCCATCCTTATCTGTGATCGGTGGGCTGCTCGTCCAGCCGCAGCGTGTCCTCGTAGCGCAGGTAGTCCATCTCCTCATGGCAGCGCTGCTTGCCCTTCGGGTACTCCACCCGGGCGCAGCCGATGCCCAGGAAGCGCAGTGCGGACACCCGGGTCACTTCGgccacctccaccaccaccctGCCGGCCACTTTGTCTCCGCTGGAGTAGTACGCCTTGCTAGGGTCGCTGAAGACCACCTCGAAGGTCTTCAGTTTCTTGGTCATCACCACCATGACTGCAGGCTTTGTTGGAGTGTAAATCCGGATTCAGTGGAAACTAATTCAAAGCGGTGTGTGCGAGTTTGAACGGGGatggctttctttttttgcagTTGTGATCTAAAAACCCTACGATCTCTATCGCACTGGTTTGTGAAGTCTGCTGTAGTCTGTGCCTCCGTGCTCCACCATCTGCCTGTAACTCTAGAGGGTGTAAACAGGAAGGCTGGCTTTTATACCCCGGGCGCTAGCTAGTGAATCAGCGCCG
>TU172572
aacgaacccATAGGATtccatatacaaatacaaacaatactttttgcaattcgaagatataaaaaaaaatatatatgtacactttTACAAAAGTCAAACAATAGAACATTGTAGCTTGAAGAAATAGTAAATTGTTCTTGTTGAAGAACCCCACAAATGAAATGCTGTTCAGGAGTAGCCCTTGAAAGTTCtattaatcacaaaataaaaataaggtgCAATTCCTGATGTTAGAACCAATGTCAGGGGTTTGAGCCCAAGAACAGGGCTGCATTTGGCACTGGTAGTGTCAGAAAAGTTGACGTGACTAAACTCACGATCCAAAAGTcgagcagatttaaaaaaataattcgGTAGCAATTAACTAGGTTTGATCTGAATGCAGTTGGAGTTCTTGTGCTCAAAATCGGGGACAACCTCTAACAAGCGGAAAGACTCAACCCATGGTTGTATGAAGATCACAGGTAATCCGgaagacaatttaaaaaaaactttcctgTAGGCAGTTATAGAGCAAGTTTGCATCCATAGAAAGTGCAATATCACAGTTGAAAAACACTGATGTACAGCAAGTTTCAATACAATCAAGTCTGCATGTTACAATCCTCAGAAGAAATGCATAGCAAAGACCAGACAGACATGCAGAAGATCTCAAATACAAATCACGGATAATAGTAGTCATTTTTCTTTACTCTTCTGCAAGAACAGGGTGTTGCACACTCCTTCTTTGAGGAGAGAAATATAAAAGTGGTTCCTTTACTGAAAGTCCCACCCCACTGACATCAGGTATTTGGGAATGACTAAGACTGCAAACCGGACGGATCCAGAAAGTAGTGTGTGTGGGGTTTCAGGGTGACCCAAATTAAGCCGAAAGCTTTTGGGGGCTTGCAAAGGCCGCAAGCCTGTAGGAGTGTTCTAGTCAACTGCCCCTATTAAGATGGCTATGTTGCGAGTTATCCAACTTACAAAGTCTTTAAAACACAAGGTCGGACAGAACAGGCCGACACCAGGACAGTACCCCAGTGGGTGTGGTGCGCGACGACTCTTTGGAGGGCTGGAACTTTGAAGAGCACCAAGAAAAAACGCATAGGCCTATATAAATCTATAGGACGTTCAGCTCAAGTCTGCATGGAGAGACAAAGACTGACAAGTGTAGGCACTAAGCTTGCAGGGGCTGGTTTTCACCCTCTTTCCCGGCCTGGAACGCCACCTTTCTCATCTGATCCATCGATCCAGGCCGGCCTCGCAGAGAAGCCCTCGTCCTCAGTCGAGATTTCCAAACCATCTCTTCCTCCTCGTTGGCGGTCCCCCTTTTTTTACCATTCAAATgcggaagaaaaataaaacgctAGGCGAGAGTCACTGAGGAATCTGCGGCATGTCTCTCTAGCACGGGGGGCTGACGGCCATCATGTTGCCGTTAAACTGCTGGTTCAcctgagaggaagaggagagaggggtgggggttagTTTAAAGACCAAGCAGACAGCTTTCCAAAGAACAAGTGTTGAAGATATaattttatgcttttaaaagagCCTGGGAACAGGCCCTTACCTCGGAGTACGCAGGAGGAGGCGGGAACTCGAACTGGGGGACGTTCATGAAGAGGGGGCTGTCGCCGCCGTCATAGTCGTCCAGCAGCGGGGTGAGGGGTGTGTCCAGGCGGCAGTCACGGGCGATGTCGCAGTAGCTGGGGGGCGCTGAGGGCATGCGCAGGGACACCCAGCTGTTGGAGCTCGTGCTGCCGTCCTGGCTGGTCATGCTGTTGGTGCGGCTGCTAAGGCCATTGTAGGGGACAGTGCCGATCACGAGGGGCAGCTCCATCACCAGTTTGTCGCTGCCGGGGATGTGGACGTAGATCTGcgggagagaggaggagcaggagattAGAAAACGCTCTTCACGACCGAAGCAGGAACGGTTCTCGGGCTGCGGGCATCCAGGACACGAAGCGGAGGCGGGGACTCACCATGAGGGCGTACTCCACACGGATGATGTTGCAGCCCAGGATGGAGGGCTTGATCTTGGGCACCCGGATGCTCTTGCCCTGCCAGGCGTCGCACATGCCCGAGATGATGTGGTTGCCACGGACGGACGACAGCTTCTGCTGGAAGACTTTGGTGCGCCCGTTGGCCTGGTAGGTGTGCTTGGCCACGATGGCTGCCTTGGGTACCACGATGCGGGAACAGGTGTTCTCGAACTTGGCGTCGATGCAGATATCCTCGCcttCAGAAGCCCTTGCGGTCAATCTTGGCGTTCAGGGACACTTGCCCGTCAGGAATGAACATGCAGGTCACTTTCTTCTCTTTGGTCCCAGCAGCTGGAGACCATGAGGTCAGGGGTGTTGACATCCAAGGGCTCAACCACATCGAAGTTCTTCTTCACTTCCAGGGCCGGCTGGGAGGGTCTCTCCAGCAGGGCCTTAACGTAGTACTCCACGCTGCCAAACTTGCCCTTGTAGGACGAAAGAGAAGGTAGATGTTGAACTATTGTGTAGTttgcttaaaaacatttaaaacccttattaatgcacacacactaataaTTTGGCCTATAATAATCTGTCTCACTGAAGACCTCCTGCATGCGTCTCCCAACTAGGCCAGAGGCTGAATGTCCGCCTGCCAAGTACAGTAACCCCGCTCCATTTGTCTCCGTGCCATCACCCCTGGCATCCGTGCCCAGGGAATCCCCTGCTAGCACACCCTGACCTGGCACAGCAGGCTGTAATTCACCCCTGCGCTGCTGCTCCACAGCGCCCCCTCCGGCGCCCAGGCCTCGGCCGCTGCCACTGCGCTTCAGTGAAATAAGGGCTGCCCTGGACCCAGTGACAGGGGGCTCGCTGAAACAACCGACATCCACTAATCGGAGTTTCTATCACTttcgcatatatatatatatatatatatatacacattttttgcaTTACAATAACCTCGTTTCAATACAGAACAAACTTCCCAGAACTCAAAACGTACTTTACTTTGGAGGCCAGCGCTTGTGCCAGTCTACGCATCAGCTGCTCGAAACCTAAAAATCAATTAACCACTTAACACTCTCCTATCCCAATTAGCATGGGCTTCATCCACAAAGACAGCAGCAACAATTAAAACCTCAATAATGAGCAATTAGAGCAATGACGGGACCCCTGCTCTTACCGGTGGGCTGCTCGTCCAGCCGCAGCGTGTCCTCGTAGCGCAGGTAGTCCATCTCCTCATGGCAGCGCTGCTTGCCCTTCGGGTACTCCACCCGGGCGCAGCCGATGCCCAGGAAGCGCAGTGCGGACACCCGGGTCACTTCGgccacctccaccaccaccctGCCGGCCACTTTGTCTCCGCTGGAGTAGTACGCCTTGCTAGGGTCGCTGAAGACCACCTCGAAGGTCTTCAGTTTCTTGGTCATCACCACCATGACTGCAGGCTTTGTTGGAGTGTAAATCCGGATTCAGTGGAAACTAATTCAAAGCGGTGTGTGCGAGTTTGAACGGGGatggctttctttttttgcagTTGTGATCTAAAAACCCTACGATCTCTATCGCACTGGTTTGTGAAGTCTGCTGTAGTCTGTGCCTCCGTGCTCCACCATCTGCCTGTAACTCTAGAGGGTGTAAACAGGAAGGCTGGCTTTTATACCCCGGGCGCTAGCTAGTGAATCAGCGCCG

Function

symbol description
txnip Enables ubiquitin protein ligase binding activity. Involved in cellular response to tumor cell; keratinocyte differentiation; and negative regulation of cell division. Located in cytoplasm.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172571 False 3186 TUCP 0.51 4 19891167 19895599
TU172572 True 3671 lncRNA 0.50 4 19891167 19895599

Neighbor

gene id symbol gene type direction distance location
AMCG00012496 NA coding upstream 34464 19852153 ~ 19856703 (+)
AMCG00012497 NA coding upstream 64904 19817519 ~ 19826263 (+)
AMCG00012495 NA coding upstream 103525 19763003 ~ 19787642 (+)
AMCG00012492 NA coding upstream 263798 19617738 ~ 19627369 (+)
AMCG00012493 bcan,LOC106569870 coding upstream 309728 19558654 ~ 19581439 (+)
AMCG00012511 NA coding downstream 237723 20133322 ~ 20134653 (+)
AMCG00012513 shc1 coding downstream 330799 20226398 ~ 20234055 (+)
AMCG00012514 NA coding downstream 344235 20239834 ~ 20240031 (+)
AMCG00012517 NA coding downstream 387650 20283249 ~ 20291367 (+)
AMCG00012518 LOC107669979 coding downstream 405227 20300826 ~ 20327286 (+)
G137242 NA non-coding upstream 97635 19788987 ~ 19793532 (+)
G137196 NA non-coding upstream 201382 19659746 ~ 19689785 (+)
G137177 NA non-coding upstream 381969 19504883 ~ 19509198 (+)
G137155 NA non-coding upstream 465629 19423553 ~ 19425538 (+)
G137144 NA non-coding upstream 495414 19361344 ~ 19395753 (+)
G137332 NA non-coding downstream 269684 20165283 ~ 20228036 (+)
G137337 NA non-coding downstream 274827 20170426 ~ 20237873 (+)
G137348 NA non-coding downstream 305952 20201551 ~ 20201804 (+)
G137364 NA non-coding downstream 426007 20321606 ~ 20328824 (+)
G137494 NA non-coding downstream 638153 20533752 ~ 20533959 (+)
G137252 NA other upstream 75550 19814925 ~ 19815617 (+)
AMCG00012480 NA other upstream 540965 19332328 ~ 19350202 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other upstream 652209 19237689 ~ 19238958 (+)
G137083 NA other upstream 716746 19169748 ~ 19174421 (+)
AMCG00012471 NA other upstream 837338 19047497 ~ 19053829 (+)
AMCG00012512 NA other downstream 351052 20246651 ~ 20270919 (+)
AMCG00012516 NA other downstream 435482 20331081 ~ 20344646 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other downstream 505410 20401009 ~ 20422556 (+)
AMCG00012521 NA other downstream 535326 20430925 ~ 20445287 (+)
AMCG00012523 NA other downstream 585515 20481114 ~ 20493787 (+)

Expression


Co-expression Network