G137408


Basic Information

Item Value
gene id G137408
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20261002 ~ 20270864 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172771
aacaaaatatatgtgcacatgtaaatacaaattcacagtGATTCAGTTGTACAaatctgcccccccacctcaaaATGATCATATCAGCCCGTACAAGAATCAAGATCACACAGCTAAGAGGTATTCCTTCAGTTtccaagtacaaaataaaaaattcttGCCCCTCAATTTAATTTCACTCTGATCttcccattaaaaacaaaaaaaagccccaaaacattaaaacgacacacagtgtatttaaataaactgtccTCATTTACAACTTTTGATTGACATTTGATTAGAGAGACTAACTTCAAGAGAGCCTTGCGCTTCCATCTGTCAATCAAAAAGGTACAGCATAGACAATAGTATCTCTCTCGGCCTGTGGACTGGGTGTGGTTTCGTGCAGGTCTCTGCTGCAGACGGTCTGCAACTGATGTTACGGCCTCtgtccataaatattttacatacaagaCAAGGAACTgaatttaatcattattaaatactaaattaaagagagaaataagattgcagattataaaatatgtatataaaaatacaaaagtaaaatatatccCAGTGAGGAACAGCAGTTGATTAATTCTGGCTAACTGCAGACAGGTAAGAAGTTCTCTTCTTCGGAGAAAATGCAACATAGCAGTAGTTTTagtaaagaaaacaaccaaaaaaaatattaataaggCATATCAGTGagatttcattatttacaatttatCCCAATGCAGTGTTCCAGCTGAACTTTCACCTTTGACCCCTTACCACAAGGGATTAAGGGTACAGCACAGTTCCACTCATTGtaatcagtgttttgttttgaggagTTGGccaataataattgtattgctcTATACTGTACTGgtactgtattatatacactgatcagcggTCTTGTGTGACTTTGTTTGTCCCCATGCTTTGGTGGACAGTGTTCTGTGCAGCGCAGGGCAACAGAGGATCCGTGTCTCCAGGAACAAAGCTGGAGGACCTGCTGTACTGGGTCTCTCCAGTAAACCGTGAGTGTAGTGAGCTGTGTGTATGTAGTGCATAGAGGGAGAATGGTATTTCAAACATGCTCATGGGAACTATAGAATAGGTGTATGgtgcttaaaaacaaactataataTCATCACTGTGATGGTATCAAAACCACATGCTGATTTCGGGCAATGCGCTGTGCTTTCATAATCAGGCTGGGAAGAGCATGTGGTGGAGTAGGAAAGTGGGACAGTGTGTCAGATTGGAACAGGTGCAGACAGCAATGTAACAGTGCGTGTGAGAGAACGTGTGAACTAAACATTATACATAACCAGATTGACAGGGAATGGGTGCAGGCAGCATTCGAACCTAAAACCCCGCTCATAATACCCCCACcagaaaaccttttaaaaagacCACATGCCACACGGAGTTGAGCTGAGAGTTTGCGCAGCTGGTCTTTTTCATTGGTGACAATTCCAGATGGTCCAGAAAATGTCTAAATGGATTTTTAGTCAGGACAAGGCAATATAAGTGTAGAGGACAGGAGAGgagcgggggggtggggaagacaagacagacagagtgaGTAAGAGAGCTCAACagaagagagggaaggggaTTGTGAAAGCAAGATGGTGGGATGGAGATAACATGAGCAAGAGAGGGAATGACATGTAGGGAGAGAAAGAGCTGGAGGGAGAGGacggagagagaggcaggggcgTGGGGTCTAGCAGGAGCTGGTCTGCAGGTTGCTCTCCGTCAGAATGGAGGTGATGGCGGTGGGGTCGTAGctcccctcctcctcatccGAGCTCAGCGCTGTGGAATCCAGGGCACTGATCTTGCTCTCCAGCTGCTCCCGCAgctcctgctgctcctccagctccctcaGGGCCTTCCTGCGCGCCCCCTCCAGCCGCTCCACCTCCCCCTCACCCTCGTCCACCTGCCTCTTCAGGGCCTTGATCTTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172771 True 1961 TUCP 0.44 2 20261002 20270864

Neighbor

gene id symbol gene type direction distance location
AMCG00012507 smg5 coding downstream 82038 20168155 ~ 20178964 (-)
AMCG00012508 paqr6,LOC107728479,LOC107688246 coding downstream 103790 20147777 ~ 20157212 (-)
AMCG00012509 NA coding downstream 142437 20113894 ~ 20118565 (-)
AMCG00012510 NA coding downstream 147866 20108162 ~ 20113136 (-)
AMCG00012506 NA coding downstream 153754 20103314 ~ 20107248 (-)
AMCG00012520 NA coding upstream 21866 20292730 ~ 20297061 (-)
AMCG00012524 NA coding upstream 432565 20703429 ~ 20742998 (-)
AMCG00012526 NA coding upstream 562077 20832941 ~ 20834492 (-)
AMCG00012528 NA coding upstream 587861 20858725 ~ 20859203 (-)
AMCG00012527 NA coding upstream 588401 20859265 ~ 20862618 (-)
G137384 NA non-coding downstream 33043 20167075 ~ 20227959 (-)
G137390 NA non-coding downstream 48690 20209567 ~ 20212312 (-)
G137389 NA non-coding downstream 59107 20201564 ~ 20201895 (-)
G137270 NA non-coding downstream 360562 19900206 ~ 19900440 (-)
G137248 NA non-coding downstream 486916 19768128 ~ 19774086 (-)
G137449 NA non-coding upstream 105579 20376443 ~ 20377953 (-)
G137472 NA non-coding upstream 152523 20423387 ~ 20423680 (-)
G137495 NA non-coding upstream 266084 20536948 ~ 20537194 (-)
G137518 NA non-coding upstream 271901 20542765 ~ 20552145 (-)
G137517 NA non-coding upstream 298954 20569818 ~ 20577843 (-)
AMCG00012503 NA other downstream 350624 19903106 ~ 19910378 (-)
G137246 NA other downstream 467471 19714162 ~ 19793531 (-)
G137199 NA other downstream 753608 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1217553 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 1327801 18927379 ~ 18933201 (-)
G137608 NA other upstream 764299 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 769225 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 1162800 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 1223363 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 1807309 22078173 ~ 22088469 (-)

Expression


Co-expression Network