G137449


Basic Information

Item Value
gene id G137449
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20376443 ~ 20377953 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172818
TCACGTTGTACAGTTTATTCTCATCCCTTTCAACTTTATTACACACAGCCAGCCACAGACATTGACCACAATCACCTgaaagcacatacacacacaagggAATTACATATGTACACATCATGTTATTTCCATCAGACTCATTGCTTAACTGTCCTTGTTTTCTAGGAAAATAAGTGTCAGTTAGTGAACCAGGGAttcagaggtgtgtgtgtgtgtgtgtgtgtgtgtgtggaagagccagactggagccagcgctgtgtggactatagtataggaTAGGATAGGATATTTACATCCACCTACAGCtttatactctctctctccatcttcccCACTCCTTTGGCCATGGGTTCAGACCCGGGTTCTGGTTCTGTGCCAGGGTGACTGTCCGGGTCAAGGAGGTGCCACTGGATGAACACGAGATAAAGCAGTGAGCCCAGAACTCCACCAAGCATTGGGGCGACTAATGGTACCCACCACCAGTGAGAGTATgccctgcagagagacagaaagagaggtcgagatggagagggaggaagggatggtgagaagaagagaaagaggaaaagagGGAGATTTTGTGAGTACAGGTTATAGTGTATACAGTGAGTATAGAATGTACAGTCTACTGTGTTCAATGTACAGAATGTGTATGGAGTGTACAGTGTATAGAATATTTATAGAGACTGTAAAGTATGTATAGAGAGTGTATAGATCAGTGTAGGGTTGACAGTGTGTATAGAGATTGTATATGGTGTGTATAGAGCAgtgtaatgtgtgtatataaagtgTACAGTGTGAACAGAGTGTATAGAGTAGTGTACAGCATACAGAGCAGCCTCGCCACCACTGGCTTAGTGAGAGAGGggtagagggagagggggagtaTTCAGTCTGTATAAAGAGTGTATAGGGCAGTGTACAGTATGTATAGAGCAGTATACCACATATAGAGCAGTGTACAGTGTGCATAGAGCAGTGTATAGAGAGTGTATAGAGATGTGTTCAGTATTTAGagtagtgtacagtgtgtatacCATAGTGTACAGTGTGAATAAAGCAGTGTACTGTGTATAGAGCAGTGTATAGAGAGTGTGTGTTCAGTATTTAGAATAGTGTACAGTGTGAATAGAACAGTATACAGAGCAGAATACAACACAGagcagtgtacagtgtgtatagaGAAGTGTATAGGAGTGTATTGAGGAATGTAGAGTATGCACAGAGTCACTGACGTGAAAACCTCAGGCCCCCAGCCTGCGGTCAGGGTGAACAGCCGGGGCCCCAGGTCACGCGCCGGGTTAATGGCGGCCCCGCAGTTGGCACTCATCGACATGGAGATGCCCAGCACCACCACGGCAGCCAGTGGGGGCACCAGGCCGGGGGGGGCAGGGCTGTTCAGCTTGTCATCAAGGGGCAGGATGCAGAGCAACAGCGTAGCCGTGCCGATCACCTAGCAACCACAGCAACG

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU172818 True 1471 lncRNA 0.47 2 20376443 20377953

Neighbor

gene id symbol gene type direction distance location
AMCG00012520 NA coding downstream 79382 20292730 ~ 20297061 (-)
AMCG00012507 smg5 coding downstream 197479 20168155 ~ 20178964 (-)
AMCG00012508 paqr6,LOC107728479,LOC107688246 coding downstream 219231 20147777 ~ 20157212 (-)
AMCG00012509 NA coding downstream 257878 20113894 ~ 20118565 (-)
AMCG00012510 NA coding downstream 263307 20108162 ~ 20113136 (-)
AMCG00012524 NA coding upstream 325476 20703429 ~ 20742998 (-)
AMCG00012526 NA coding upstream 454988 20832941 ~ 20834492 (-)
AMCG00012528 NA coding upstream 480772 20858725 ~ 20859203 (-)
AMCG00012527 NA coding upstream 481312 20859265 ~ 20862618 (-)
AMCG00012537 NA coding upstream 523771 20901724 ~ 20905761 (-)
G137384 NA non-coding downstream 148484 20167075 ~ 20227959 (-)
G137390 NA non-coding downstream 164131 20209567 ~ 20212312 (-)
G137389 NA non-coding downstream 174548 20201564 ~ 20201895 (-)
G137270 NA non-coding downstream 476003 19900206 ~ 19900440 (-)
G137248 NA non-coding downstream 602357 19768128 ~ 19774086 (-)
G137472 NA non-coding upstream 45434 20423387 ~ 20423680 (-)
G137495 NA non-coding upstream 158995 20536948 ~ 20537194 (-)
G137518 NA non-coding upstream 164812 20542765 ~ 20552145 (-)
G137517 NA non-coding upstream 191865 20569818 ~ 20577843 (-)
G137558 NA non-coding upstream 441372 20819325 ~ 20829367 (-)
G137408 NA other downstream 105579 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 466065 19903106 ~ 19910378 (-)
G137246 NA other downstream 582912 19714162 ~ 19793531 (-)
G137199 NA other downstream 869049 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1332994 19032603 ~ 19043449 (-)
G137608 NA other upstream 657210 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 662136 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 1055711 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 1116274 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 1700220 22078173 ~ 22088469 (-)

Expression


Co-expression Network