G137559


Basic Information

Item Value
gene id G137559
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20832999 ~ 20916282 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172975
CCTTTTGAATACCGAGCCATGTTTGTTCAATCCATGCACTTCACCATCCGCACTCACTTCCACCATGGACAGGGAGCCTGGAATGCGGTACCACTTCTCAGGGCCAGGACAGGAATTCCCACTGACACCCAGCTTGACCAGGATTTCATCTAGATTGTTCACCCCCAGCACCCAACAGGCCCACAGGAGTAGTACTTGAGCTCGCCTGGGACTGCCATCCAGGACACACTGCCAGAGCCATCGTAGCTCAGTGCAGGCCTGTGGTTCAGACAGACAATGCCACTGGAGGGATTGCAGCCCACCACAAACTTGTCCCCACCAGCACCAATCTGGATCAGGTGAATCCAGGCAACCTGAACCAGATTGATGCTGGTGGGGACAAGTTTGTGGTGGGCTGCAATCCCTCCCTAGAGGCATTTGGTAAACATGTCAGTGTAGGGCCTGCTGGGCTCTGGAGAGTTGGCCTTGATGGCCTGGTCTTCAAGTGGTTTCAAAAAGGCTGGGTCCAGGTGAATCCAGGCAACCTGATCCAGATTGATGCTGGTGGGGACAAGTTTGTGGTGGGCTGCAATGCCTCCCACAGTATCTTCTGTCTGAACCACAGGCCTGCGGTGAGCTATGATGGTTCTGGCAGTGTGTCCTGGGTGGCAGTCCCAGGCAAGCTCAAGTACTACTCCTGTGGGCCTGTTGGGTGCTGGGGAGTGAACAATCTAGATGAAATCCACGTCAAGCTGGGTGTCGGTGGGAATTCCTGTCCTGGCCCTGAGAAGTGGTACCGCATTCCAGGCTCCCTGTCCATGGTGGAAGTGAGCGCGGATGGTGAAGTGCATGGAGTGAACAAACATGGCTGGGTATACAAAAGGATTGGTGTCAGTGCCTGTAACCCCTTTGGCAGTGGGTGGGAACATCTAAGGGTAGCTGGAATTAGCAGCCATGTGTCATATGATCGTGGAGCCCTGTGGATTATCTGCAGAAATGGTGAAATCCAGAGGTGCAGGTTCTCTGAAGCCCTGTCATTTGAGTGAATGTTGACCTCTTGTGTAAGCTGATGCTACTTTTGAGTTCACATGGTTTTGGGAGAAATGTGCTTCTCTGGCTTCCAGATGCTTTGTGATCTGTTCCATGTGTTAATAAAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU172975 True 1136 lncRNA 0.53 6 20832999 20916282

Neighbor

gene id symbol gene type direction distance location
AMCG00012524 NA coding downstream 90001 20703429 ~ 20742998 (-)
AMCG00012520 NA coding downstream 535938 20292730 ~ 20297061 (-)
AMCG00012507 smg5 coding downstream 654035 20168155 ~ 20178964 (-)
AMCG00012508 paqr6,LOC107728479,LOC107688246 coding downstream 675787 20147777 ~ 20157212 (-)
AMCG00012509 NA coding downstream 714434 20113894 ~ 20118565 (-)
AMCG00012545 NA coding upstream 203834 21120116 ~ 21121378 (-)
AMCG00012548 NA coding upstream 271895 21188177 ~ 21212016 (-)
AMCG00012547 NA coding upstream 308459 21224741 ~ 21230841 (-)
AMCG00012552 NA coding upstream 353458 21269740 ~ 21274408 (-)
AMCG00012551 NA coding upstream 367019 21283301 ~ 21290412 (-)
G137558 NA non-coding downstream 3632 20819325 ~ 20829367 (-)
G137517 NA non-coding downstream 255156 20569818 ~ 20577843 (-)
G137518 NA non-coding downstream 280854 20542765 ~ 20552145 (-)
G137495 NA non-coding downstream 295805 20536948 ~ 20537194 (-)
G137472 NA non-coding downstream 409319 20423387 ~ 20423680 (-)
G137591 NA non-coding upstream 35656 20951938 ~ 20956378 (-)
G137605 NA non-coding upstream 113810 21030092 ~ 21093996 (-)
G137601 NA non-coding upstream 118248 21034530 ~ 21039767 (-)
G137619 NA non-coding upstream 180640 21096922 ~ 21097296 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding upstream 250176 21166458 ~ 21169358 (-)
G137408 NA other downstream 562135 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 922621 19903106 ~ 19910378 (-)
G137246 NA other downstream 1039468 19714162 ~ 19793531 (-)
G137199 NA other downstream 1325605 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1789550 19032603 ~ 19043449 (-)
G137608 NA other upstream 118881 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 123807 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 517382 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 577945 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 1161891 22078173 ~ 22088469 (-)

Expression


Co-expression Network