G137583


Basic Information

Item Value
gene id G137583
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21056695 ~ 21059263 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173010
CAGACTGGAGCGCAGCTGCTGCACCAGCTCTGACTGGCATTGCCGCTACTCGCCGCCTGCTCCACTGAATGAGCGAAAGTGTGAGGGTGCAAACGTGCTGATAATAAATATAGTCCTAACCTACACAGCTACGGGGAAATTAAACTTGTGGAAGTCCTGATCAGCTAGTCAAGATGTCTGCCTCTGTCATCACTGAAGGAGACATGGTGATCATCACCCAGGTGTACCCACAGGCTCAGGGCAGCATGCCCTCCAGTGCTCCCCTAGCCCAGTCAGGGCTGCCCCATGGCTACACCTCACCAGGGTCTGCAGCTTGGAAGCACTTTGTAAAAGGAGAGCCCACAGCCCTGGGGGTTGTCCAGATCATGATTGGAATGTTTAATGTCGGCTCTGGAGTTCTTGTGGAAAGAGAAATGGACAGCATAGGGTTTTACATCGGGCTCCCATTTTG

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173010 True 451 TUCP 0.53 3 21056695 21059263

Neighbor

gene id symbol gene type direction distance location
AMCG00012538 sf3b4 coding upstream 5890 21044249 ~ 21050805 (+)
AMCG00012540 NA coding upstream 18266 21013421 ~ 21038429 (+)
AMCG00012533 rbm8a coding upstream 99772 20951848 ~ 20956923 (+)
AMCG00012529 lix1l,LOC106588578,LOC106570188 coding upstream 106241 20940980 ~ 20950454 (+)
AMCG00012535 lix1l,LOC106570188,LOC106588578 coding upstream 126311 20924466 ~ 20930384 (+)
AMCG00012544 sv2a,LOC107592174 coding downstream 45856 21105119 ~ 21109248 (+)
AMCG00012543 sv2a,LOC107592458,LOC107726650,LOC107671386 coding downstream 50275 21109538 ~ 21112947 (+)
AMCG00012542 nr2f5,LOC108433883,LOC107592459,LOC107726692,LOC105005680,LOC107592141,LOC103038004,LOC107671473,LOC100380645,LOC105891836 coding downstream 88975 21148238 ~ 21166777 (+)
AMCG00012549 NA coding downstream 240801 21300064 ~ 21307188 (+)
AMCG00012550 NA coding downstream 255772 21315035 ~ 21317648 (+)
G137539 NA non-coding upstream 299431 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 522736 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 727871 20321606 ~ 20328824 (+)
G137337 NA non-coding upstream 818822 20170426 ~ 20237873 (+)
G137634 NA non-coding downstream 160936 21220199 ~ 21221044 (+)
G137631 LOC107575789 non-coding downstream 172717 21231980 ~ 21267912 (+)
G137645 NA non-coding downstream 248955 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 542736 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 720803 21780066 ~ 21786045 (+)
AMCG00012539 otud7b,LOC106581836 other upstream 16946 20992490 ~ 21039749 (+)
AMCG00012523 NA other upstream 562908 20481114 ~ 20493787 (+)
AMCG00012521 NA other upstream 611408 20430925 ~ 20445287 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other upstream 634139 20401009 ~ 20422556 (+)
AMCG00012516 NA other upstream 712049 20331081 ~ 20344646 (+)
G137633 NA other downstream 154334 21213597 ~ 21219163 (+)
G137636 NA other downstream 165478 21224741 ~ 21230836 (+)
AMCG00012546 NA other downstream 186400 21245663 ~ 21253003 (+)
G137629 NA other downstream 211097 21270360 ~ 21332070 (+)
G137644 NA other downstream 243962 21303225 ~ 21316451 (+)

Expression


Co-expression Network