G137591


Basic Information

Item Value
gene id G137591
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20951938 ~ 20956378 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173023
CTTCTTTATTCattaaaagcacaattaaaaattTGATAAGATCTGAACCAAAACCTAAAATGTTCACAACATTCACACTTGAAACATTCTccaaaaatatgacaaaacgcagcaacttttaaaaccatttaatataCCAAAttgtatacaaaattaaaccatCACATCTGATGTGGATCATTCAGAGAGGACtgtacacaaaaaacacaaaacattttattgttgcagGTGTTGCGTtttacctttaaaacaaaacaaggactCCCGGTTAGTCTACCTGAGATGAACGGCAGCTGCAATGACAACAGCTGTAGACACCGGCCAGAGTCAACTCTTCAGGTTGTTCAGAACTTCATTATAGAGGCTGGGGCTAAAGGGCCTCTCTCACTTAGCTGTTAAAATCAGTATTGACCCGTTACATTTACACTGTATAGTGTTTTCAAGGTGAGACAACAGGACATTTGCGCTTAAAtcaagatatatataaaaaaaaaaaaaacgggaataaaattaggaaaaaaaaaagcttcgaCATTATACACtatccaaaacaaaacctaaaccACTGCCTTCTGCCGTCTTCCATCCGGAAGCCCCAGTCCGCAGCTTGGTTCTCTGCACTGTGGGGCTCAGCGGCGCCTCCTGTCTGGGCTCCTGCTCCGTCTCCTCCCACCCCTACAAGACCGGGAAATACAGGACAAATTCCAAATGAAAATGGAGCAATATTGCACTCTTCTACAGTGTGAGGAAGTGACAATGCAATTTTCCTTAACCAACGCATTCTGGCTTATTGtgaacaagcaaaataaattggGAAACTAAACAACACTTTAAAGCAGGAGCTGAACGCTGATAAATCGAGATTCTCTCCAGGCATACGCAATCAGCCTTGTGTTACTAAAAGACTGATTCCAGTGCTGAGAAGATCAACAATTCACACTATTTATTAATAGGCATTAGCAATGCATAATAGAAAGAATGGCCAAAAATTTAATCCCCTTTCCTGATTGCATTGTATAATATGATGCCAGTGTGATTTACTTAAATAAGACATTTCAAAGCCATCATATCAGACTAACTGCAGTTTAAGAACAACAGTGTTGACCCGCTTGCAGACCGATCTATAGAAATAAGACCAATACACCACCAAGCTGGGGCCTGGGACAGCTACTGACCTCCTCTTGCTCTTGGGCGGCCCTCGTACGAAGCCCCAGTCCACACTGATTGGCTGACCCATGAGATCTTGACCGTTTAACCCTTCCATAGCAGCCTGGGCCTCTTTGTAGGTCTCGTACTCTACCAGCGCATAACCTTCAGGTAGCCTGTCCTCCGGTCCAAGTTCAGATGCAGATTCTTGATTTCTCCGAACTCTGCAAACTTGTCGTGGATGTCCTCTTCGGTGGCTTCCTCGTGCACGCCCGTGACAAACAGGATCCAGCCCTCCACCGCTGTGAAGCAGACAGATCAGCTTAACATTGGAAACTGAGCAGTACAGCTGTGCTTACATGTTGAGAAGTCATGGACAAGGcaggtaaaataaatgaaatctcACATCTCTGTGGGCCTGGCTCGTCCCCATCCTGCTCTACTGTGTCATAGTCCTCCCGCACCCTGGAGCGCGCACCTTCCTCTGTGGCACAGAAACAGTGTTAGTTTACCTTCACCAACAACAAAGCAGGTCTCAGACACTCACGAAGGCCAGGTCAGTTCAGGGCCGGAGTGAGGTCTTCCTAATCATCCAGGGGATTCAAAACAGCACGCTACACCTTCAGACTGCACATAAACGCTACAATTACAGGAAACATAAGGAAGTAGTCTACAATTTTCACAAAGGAATATacaatgaaagcaaaaaatactggaacagaggagactacgtggatgacttgattcaagtcttcaaaatcatgaagggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacatacggacccagggacacaaatggaaattgggcttcaaggcattcaagactgaaaacaggagacacttcttcacacagagaggcatcacaatctgaacaaaatccccagcgatgtggcagAAAagaatttgggaacattcaaaaatagactggagaggatccttggatcactcagttattaatggacaccaaacaagcacgatgggttgaatgggctcctctcgtttgtaaactctGTTTCCTACTATTAAGTACAAGTAAACTGAAACACTATTCATCACCACCCTGAAGTGATCTTAAAGCCCACACATAAAGCTTTTACTCCATGACTGGATAGTTTGTTCAACCACCCCATCATTAATTTTCATACGAGCCACTTGTTCCAAATATGAATTTCCACTTGAGCCCTCGTCCTGTTTTCAGTGTTGTGTGCGTAGTAGCCCAATTTCCCCCCCATTTATTTAGTTATCAACCCCCTTCTGGATGACATCTAGTGTGTTCAAGACCGAAGAGGTCAGTTCCTTCAGTCTGTACAAGCACATATAGACCAGATAACCTGTTGTGCACGGATTCCTCACGTCAGCACTTTAAAGCCTCACTACAAAGATATATCCTACAATCCAACAATACTAATTACATTAAGTTGGTATAAAACAAACTCACCGGATCCAAAGCCTCGTCCTTTCCGCCTCTTCGCCTTCTCCTTCAGCTTGTGGATGCTTTCTGTGGGAGGATGTAGACAGGATACAACGCATGGGAGTGTTAACGTTATATCTCAATGAGACGAGCTGAGATCAGACCGTTAAAACATGAATTATCAATCATCGACTCATATTTCCAAAAACCCCAACGTCAAATACTTCCAGAAAAAAGTTTAAAGGTAAATGCGTCTTATTTAAACGATTCATTCAACTGTGAGAATTGAATTACTGTTAAACACAGTTTTGGATGTGTGGTAGATAGACCACTGCGTTTACAAATTGGAATAAATAACTACTGTTAGACATGAAGCGGTATTAATAATGTGATGGACTGGAAACGGGTATAAGTTGAttcaaaattacattcaaaCTAAAGCAGGAGGGGCATTGAGGCCCTCGGCGAAGGCCGcgttttatattttacaaacgCTAGTTAACAACACGCTGCTCTAAAGAACCACAATCTCCGACTAAAGCGCCTAACTGCCTCcgatatgtatttaaattttacCATCACCATCCTCATCCATAGGAAAATCCTCGCCCCCCGCTTCGTGTAGGTCCAGCACGTCCGCCATCTTGTCCGcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173023 True 3250 lncRNA 0.43 2 20951938 20956378

Neighbor

gene id symbol gene type direction distance location
AMCG00012537 NA coding downstream 46177 20901724 ~ 20905761 (-)
AMCG00012527 NA coding downstream 89320 20859265 ~ 20862618 (-)
AMCG00012528 NA coding downstream 92735 20858725 ~ 20859203 (-)
AMCG00012526 NA coding downstream 117446 20832941 ~ 20834492 (-)
AMCG00012524 NA coding downstream 208940 20703429 ~ 20742998 (-)
AMCG00012545 NA coding upstream 163738 21120116 ~ 21121378 (-)
AMCG00012548 NA coding upstream 231799 21188177 ~ 21212016 (-)
AMCG00012547 NA coding upstream 268363 21224741 ~ 21230841 (-)
AMCG00012552 NA coding upstream 313362 21269740 ~ 21274408 (-)
AMCG00012551 NA coding upstream 326923 21283301 ~ 21290412 (-)
G137559 NA non-coding downstream 35656 20832999 ~ 20916282 (-)
G137558 NA non-coding downstream 122571 20819325 ~ 20829367 (-)
G137517 NA non-coding downstream 374095 20569818 ~ 20577843 (-)
G137518 NA non-coding downstream 399793 20542765 ~ 20552145 (-)
G137495 NA non-coding downstream 414744 20536948 ~ 20537194 (-)
G137605 NA non-coding upstream 73714 21030092 ~ 21093996 (-)
G137601 NA non-coding upstream 78152 21034530 ~ 21039767 (-)
G137619 NA non-coding upstream 140544 21096922 ~ 21097296 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding upstream 210080 21166458 ~ 21169358 (-)
G137699 NA non-coding upstream 347094 21303472 ~ 21306761 (-)
G137408 NA other downstream 681074 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 1041560 19903106 ~ 19910378 (-)
G137246 NA other downstream 1158407 19714162 ~ 19793531 (-)
G137199 NA other downstream 1444544 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1908489 19032603 ~ 19043449 (-)
G137608 NA other upstream 78785 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 83711 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 477286 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 537849 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 1121795 22078173 ~ 22088469 (-)

Expression


Co-expression Network