G137605


Basic Information

Item Value
gene id G137605
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21030092 ~ 21093996 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173039
aaacaatcattcataagatggttaaaagatcttggacttgggctccagcagggggaactgaccATCCctggaggtgggtcccatcatgggatcctgagctcccccagatcttgtatatgccagttcttataggcttcctccttgcccctctgatggacctccagattgacgtagtctCTCACTAgcaccatgcccctccgcgcgatgacaatcgggtccagctcctgcttattgaatagacagatattccgtccctcccacagggcctgcttcACTGCACAGACGACACGCGACCAGCACC

Function

GO:

id name namespace
GO:0005768 endosome cellular_component
GO:0005770 late endosome cellular_component
GO:0044433 obsolete cytoplasmic vesicle part cellular_component
GO:0044440 obsolete endosomal part cellular_component
GO:0031902 late endosome membrane cellular_component
GO:0010008 endosome membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173039 True 301 lncRNA 0.54 2 21030092 21093996

Neighbor

gene id symbol gene type direction distance location
AMCG00012537 NA coding downstream 124331 20901724 ~ 20905761 (-)
AMCG00012527 NA coding downstream 167474 20859265 ~ 20862618 (-)
AMCG00012528 NA coding downstream 170889 20858725 ~ 20859203 (-)
AMCG00012526 NA coding downstream 195600 20832941 ~ 20834492 (-)
AMCG00012524 NA coding downstream 287094 20703429 ~ 20742998 (-)
AMCG00012545 NA coding upstream 26120 21120116 ~ 21121378 (-)
AMCG00012548 NA coding upstream 94181 21188177 ~ 21212016 (-)
AMCG00012547 NA coding upstream 130745 21224741 ~ 21230841 (-)
AMCG00012552 NA coding upstream 175744 21269740 ~ 21274408 (-)
AMCG00012551 NA coding upstream 189305 21283301 ~ 21290412 (-)
G137591 NA non-coding downstream 73714 20951938 ~ 20956378 (-)
G137559 NA non-coding downstream 113810 20832999 ~ 20916282 (-)
G137558 NA non-coding downstream 200725 20819325 ~ 20829367 (-)
G137517 NA non-coding downstream 452249 20569818 ~ 20577843 (-)
G137518 NA non-coding downstream 477947 20542765 ~ 20552145 (-)
G137619 NA non-coding upstream 2926 21096922 ~ 21097296 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding upstream 72462 21166458 ~ 21169358 (-)
G137699 NA non-coding upstream 209476 21303472 ~ 21306761 (-)
G137701 NA non-coding upstream 214222 21308218 ~ 21315238 (-)
G137711 NA non-coding upstream 270296 21364292 ~ 21364924 (-)
G137408 NA other downstream 759228 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 1119714 19903106 ~ 19910378 (-)
G137246 NA other downstream 1236561 19714162 ~ 19793531 (-)
G137199 NA other downstream 1522698 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1986643 19032603 ~ 19043449 (-)
AMCG00012559 NA other upstream 339668 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 400231 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 984177 22078173 ~ 22088469 (-)
AMCG00012566 NA other upstream 1009657 22103653 ~ 22120556 (-)
G137974 LOC107575789 other upstream 1827887 22921883 ~ 23049378 (-)

Expression


Co-expression Network